Gene Noc_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1061 
Symbol 
ID3707244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1166070 
End bp1166714 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content46% 
IMG OID637737566 
ProductCrp family transcriptional regulator 
Protein accessionYP_343099 
Protein GI77164574 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0336611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAA ACATACTATC CCCGATAGCG TTTTCTCCAG AGGATCTGGA GTTGCTTCGC 
GGTTGCGGCG TTACTAGAAC TTACCCGAAG TATACAATCT TGATTCACGA AGGAGATCTC
AGCGATTCCC TGTATATCAT TTTAAGCGGT AAGGTGAAAG TGTATATCAG CGATGAGGGT
GGCAAAGAAG TCATTCTCCG GACTCAAAAA GCAGGAGAGT ATTTTGGAGA ACTGGCGTTG
CTTGATAAAG GACCTCGTTC AGCCTCGGTA ATGACCCTTG ATAAATCCCG CTTGTCGGTG
GTTTCAAAAA CTATTTTTAA CCGCTGCCTT ACCGAGCATC CCGATTTTGC GCTTAAGCTT
CTTTGCGCTT TAACTCAGCG AGTTCGCTCC CTGACCGAAA ACGTAAAAAA TTTAGCATTA
CTTGATGTCT ACGGCCGAGT AGCCCGCACT CTTCTAGACC TTGCCATTGA AAAAGGAGGT
AAACTAATTA TCGAAGAGCG TCCTACCCAT CAAGAGATTG CACAGAGAGT AGGAGCTTCC
CGGGAAATGG TTAGCCGCAT TATGGGAGAT CTTGCCACTG GTGGCTATAT TGAAGTTACC
TCCAAAACCA TTATTATCCC CCATCGCTTG CCCTCTGCCT GGTGA
 
Protein sequence
MPLNILSPIA FSPEDLELLR GCGVTRTYPK YTILIHEGDL SDSLYIILSG KVKVYISDEG 
GKEVILRTQK AGEYFGELAL LDKGPRSASV MTLDKSRLSV VSKTIFNRCL TEHPDFALKL
LCALTQRVRS LTENVKNLAL LDVYGRVART LLDLAIEKGG KLIIEERPTH QEIAQRVGAS
REMVSRIMGD LATGGYIEVT SKTIIIPHRL PSAW