Gene Tfu_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0117 
Symbol 
ID3579734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp140729 
End bp141415 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID637683800 
Productcyclic nucleotide-binding: regulatory protein, Crp 
Protein accessionYP_288178 
Protein GI72160521 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGACG AGACCAACGA GGTGCTGAGC AAGGCCCCCC TGTTCGAGGC GCTTGACGAA 
GAAGGCGCGG CCGCGCTGCG TTCTTCCATC ACCGAGGTGC GACTCGGCCG GGGCCAGACA
CTCTTCTCCG AGGGAGACGA GGGTGACCGT CTCTACGTCA TGCTCAGCGG AAAGGTCAAA
CTCACCCGCA AGTCCGCTGA CGGCCGTGAG AACCTGCTGG CGGTTCTCGG CCCGGGCGAA
ATGCTGGGTG AGCTCTCCCT GTTCGACCCG GGACCGCGGA CGGCCAGCGC GGTTGCGGTA
ACCGACGCTG TGTTGGCCGG GCTGGGCCAC GACGACTTGC GGCCGTTCAT CATGCGGCAG
CCCGAGGTCG CCGTCCACCT GCTGAAGGCG CTGGCCACCC GACTGCGGCG GACCAACGAC
GTGGTGGCGG ACCTGGTCTT CACCGACGTT CCCGGCCGTG TCGCCAAGGC CCTGCTCGAC
CTGGCGGAAC GTTTCGGCAA GCAGAGCGAG GACGGGCTCC ACGTCCACCA CGACCTGACG
CAAGAAGAGC TGGCCCAGTT CGTGGGCGCG TCACGCGAAA CCGTCAACAA GGCGCTGGCC
GAATTCGCGC TGCGCGGCTG GCTGCGGATC GAAGCCAAAG CCGTGGTCCT GCTCGACGTG
GAACGGCTGC GTCGCCGCGC CCGCTGA
 
Protein sequence
MVDETNEVLS KAPLFEALDE EGAAALRSSI TEVRLGRGQT LFSEGDEGDR LYVMLSGKVK 
LTRKSADGRE NLLAVLGPGE MLGELSLFDP GPRTASAVAV TDAVLAGLGH DDLRPFIMRQ
PEVAVHLLKA LATRLRRTND VVADLVFTDV PGRVAKALLD LAERFGKQSE DGLHVHHDLT
QEELAQFVGA SRETVNKALA EFALRGWLRI EAKAVVLLDV ERLRRRAR