Gene Svir_36130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36130 
Symbol 
ID8388934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3936642 
End bp3937316 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID644977628 
ProductcAMP-binding protein 
Protein accessionYP_003135395 
Protein GI257057563 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.758224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAGA CCCTGGCCCG CGCGGGCATC TTCCAGGGTG TGGAACCGGC GGCGGCCGAA 
GCGCTCGCGC AAACCCTGGA ATCAGTGGAA TTTCCCCGCG GCCACGTGAT CTTCAGCGAG
GGCGAGCCGG GGGACAAGCT CTACATCATC AAGTCGGGCA AGGTCAAGAT CGGCCGCAAG
TCGGCCGACG GCCGGGAGAA CCTGTTCCAG ATCATGGGAC CGTCCGACAT GTTCGGGGAG
CTGTCGATTT TCGACCCGGG CCCGCGCACG TCGACGGCCA CTACGGTTAC CGAGGTCAGC
GCGGTGACGA TGGACCGCCC CGCGTTGAGG CAGTGGATCT CGACGCGGCC GGAGATCGCG
GAACAGTTGC TGCGGGTGGT CGCACGCCGG CTTCGCCGCA CCAACAACAT GGTCGCCGAA
CTGATCTTCA CCGACGTCCC CGGTCGAGTG GCACGGGCGC TGTTGCAGCT GGCACAGCGT
TTCGGCAGCC AGGAGGCGGG TCTACTGCGG GTCACGCACG ACCTGACGCA GGAGGAGATC
GCCCAGTACG TCGGCGCGTC GCGGGAAACC GTCAACAAGG CGCTCGCCGA CTTCGCGCAC
CGTGGCTGGC TGCGTCTTGA GGGCAAGAGC GTACTGATCC TCGACCCGGA GCGGTTGGCC
CGTCGGGCCC GCTGA
 
Protein sequence
MDETLARAGI FQGVEPAAAE ALAQTLESVE FPRGHVIFSE GEPGDKLYII KSGKVKIGRK 
SADGRENLFQ IMGPSDMFGE LSIFDPGPRT STATTVTEVS AVTMDRPALR QWISTRPEIA
EQLLRVVARR LRRTNNMVAE LIFTDVPGRV ARALLQLAQR FGSQEAGLLR VTHDLTQEEI
AQYVGASRET VNKALADFAH RGWLRLEGKS VLILDPERLA RRAR