Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0781 |
Symbol | |
ID | 4203086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 931153 |
End bp | 931863 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081665 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_695232 |
Protein GI | 110799348 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0113537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAGAT TATGTAATTG TGCATCAGAT AAAGGACCAT GTGCTAGGAA TATAGCTATT TTCTCATCAT TATCAGATGA GGAACTATTC AAAATAGTCC ATATGACAGA ACATAAGGAA TTTGATGAAA ATGATACATT ATGTAGGGAA GGTGAAATAT CAGACAAGCT TTTTTTAATT AGAGAGGGAG AAGTGAAAAT ATGTAAAATT ACTAAAGAAG GAAAAGAGCA AATAGTATAT ATATTATCCA AAGGAGATTT CTTTGGAGAA AATAATCTTT TTGTTAATAG TAATATTAGT AATTTTTCAG CTTATGCAAT AACTTCAGGT AAGATGTGTG TATTAAATAA AAAAAGTTTA GATAAAATAC TTTTAGAAAA TCCAGAAATA TCAATAAAAA TAATAGAAGA GATGGCTAAT AGAATAAACT TAGCAGAGAA TTTAGCACAA AATTTAGCAA CTAAGGATGT AGAAGTGAGA ATAGCATCAG TGTTGGTAGA ATTTATGAAT AGATATGGAA TTGAAAAGGA AGAAGGAATA TATGTAAAGT TACCACTTAA TAGAGAACAA ATGGCAAACT ACTGTGGTGT TACTAGAGAA ACTGTAAGTA GGAAACTATC TAAATTTGAT AAAACAGGAA TAATAAATTT ACATGGAAAT AAGGCAATTA TAATTAAGGA TATAGAAGCT TTATTAGATT TAGCAGAGTA A
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Protein sequence | MIRLCNCASD KGPCARNIAI FSSLSDEELF KIVHMTEHKE FDENDTLCRE GEISDKLFLI REGEVKICKI TKEGKEQIVY ILSKGDFFGE NNLFVNSNIS NFSAYAITSG KMCVLNKKSL DKILLENPEI SIKIIEEMAN RINLAENLAQ NLATKDVEVR IASVLVEFMN RYGIEKEEGI YVKLPLNREQ MANYCGVTRE TVSRKLSKFD KTGIINLHGN KAIIIKDIEA LLDLAE
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