Gene CPF_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0781 
Symbol 
ID4203086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp931153 
End bp931863 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content28% 
IMG OID638081665 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_695232 
Protein GI110799348 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAGAT TATGTAATTG TGCATCAGAT AAAGGACCAT GTGCTAGGAA TATAGCTATT 
TTCTCATCAT TATCAGATGA GGAACTATTC AAAATAGTCC ATATGACAGA ACATAAGGAA
TTTGATGAAA ATGATACATT ATGTAGGGAA GGTGAAATAT CAGACAAGCT TTTTTTAATT
AGAGAGGGAG AAGTGAAAAT ATGTAAAATT ACTAAAGAAG GAAAAGAGCA AATAGTATAT
ATATTATCCA AAGGAGATTT CTTTGGAGAA AATAATCTTT TTGTTAATAG TAATATTAGT
AATTTTTCAG CTTATGCAAT AACTTCAGGT AAGATGTGTG TATTAAATAA AAAAAGTTTA
GATAAAATAC TTTTAGAAAA TCCAGAAATA TCAATAAAAA TAATAGAAGA GATGGCTAAT
AGAATAAACT TAGCAGAGAA TTTAGCACAA AATTTAGCAA CTAAGGATGT AGAAGTGAGA
ATAGCATCAG TGTTGGTAGA ATTTATGAAT AGATATGGAA TTGAAAAGGA AGAAGGAATA
TATGTAAAGT TACCACTTAA TAGAGAACAA ATGGCAAACT ACTGTGGTGT TACTAGAGAA
ACTGTAAGTA GGAAACTATC TAAATTTGAT AAAACAGGAA TAATAAATTT ACATGGAAAT
AAGGCAATTA TAATTAAGGA TATAGAAGCT TTATTAGATT TAGCAGAGTA A
 
Protein sequence
MIRLCNCASD KGPCARNIAI FSSLSDEELF KIVHMTEHKE FDENDTLCRE GEISDKLFLI 
REGEVKICKI TKEGKEQIVY ILSKGDFFGE NNLFVNSNIS NFSAYAITSG KMCVLNKKSL
DKILLENPEI SIKIIEEMAN RINLAENLAQ NLATKDVEVR IASVLVEFMN RYGIEKEEGI
YVKLPLNREQ MANYCGVTRE TVSRKLSKFD KTGIINLHGN KAIIIKDIEA LLDLAE