More than 300 homologs were found in PanDaTox collection
for query gene GYMC61_1555 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  100 
 
 
230 aa  478  1e-134  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  30.28 
 
 
225 aa  138  7.999999999999999e-32  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  31.63 
 
 
226 aa  137  1e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  34.07 
 
 
226 aa  135  4e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  30.09 
 
 
227 aa  132  6.999999999999999e-30  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  31.86 
 
 
226 aa  130  1.0000000000000001e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  30.49 
 
 
243 aa  130  1.0000000000000001e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  30.67 
 
 
225 aa  129  4.0000000000000003e-29  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  30.56 
 
 
224 aa  117  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  30.56 
 
 
229 aa  116  1.9999999999999998e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  35.29 
 
 
234 aa  116  1.9999999999999998e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  28.31 
 
 
227 aa  110  2.0000000000000002e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  31.84 
 
 
254 aa  110  2.0000000000000002e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  30.41 
 
 
225 aa  108  6e-23  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  27.64 
 
 
239 aa  107  1e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  28.96 
 
 
222 aa  105  5e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  30.23 
 
 
229 aa  105  7e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  32.35 
 
 
224 aa  103  3e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  29.67 
 
 
223 aa  102  5e-21  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  28.64 
 
 
248 aa  101  9e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  29.86 
 
 
241 aa  100  1e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  27.86 
 
 
232 aa  100  2e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  29.47 
 
 
234 aa  100  3e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  28.77 
 
 
231 aa  99.8  4e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  30.53 
 
 
228 aa  99.8  4e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  30.49 
 
 
222 aa  99  6e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  25 
 
 
231 aa  98.6  7e-20  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  29.49 
 
 
230 aa  97.4  1e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  27.11 
 
 
250 aa  97.8  1e-19  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  27.85 
 
 
228 aa  98.2  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  25.82 
 
 
219 aa  95.1  7e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  26.46 
 
 
231 aa  95.1  8e-19  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.15 
 
 
236 aa  95.1  8e-19  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  26.46 
 
 
231 aa  95.1  8e-19  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  27.8 
 
 
225 aa  94.7  1e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  26.15 
 
 
228 aa  94.7  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  26.94 
 
 
223 aa  94.4  1e-18  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  26.96 
 
 
229 aa  93.6  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  27.31 
 
 
238 aa  93.2  3e-18  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  28.3 
 
 
227 aa  93.2  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  26.6 
 
 
229 aa  93.2  3e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  28.64 
 
 
218 aa  92.8  4e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.8 
 
 
224 aa  92.8  4e-18  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  26.36 
 
 
254 aa  92.4  5e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.36 
 
 
226 aa  92.4  5e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  28.31 
 
 
227 aa  92.4  5e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  27.65 
 
 
236 aa  92.4  6e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  27.18 
 
 
219 aa  92  7e-18  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_008599  CFF8240_0798  transcription regulator  28.23 
 
 
213 aa  92  7e-18  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.00000000000892201  n/a   
 
 
-
 
NC_005957  BT9727_0345  Crp family transcriptional regulator  27.72 
 
 
229 aa  91.7  8e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.254354  n/a   
 
 
-
 
NC_011773  BCAH820_0411  transcriptional regulator, Crp family  27.72 
 
 
229 aa  91.7  8e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000553573 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  28.31 
 
 
227 aa  91.7  8e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.6 
 
 
227 aa  91.3  1e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  24.42 
 
 
231 aa  91.7  1e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25.69 
 
 
236 aa  91.7  1e-17  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  25.81 
 
 
224 aa  90.9  1e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_009802  CCC13826_1550  protein YieJ  27.73 
 
 
212 aa  90.9  1e-17  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  25.69 
 
 
224 aa  90.5  2e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_003909  BCE_0477  Crp family transcriptional regulator  27.23 
 
 
229 aa  89.4  5e-17  Bacillus cereus ATCC 10987  Bacteria  normal  0.0933534  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  27.83 
 
 
240 aa  89  5e-17  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  27.65 
 
 
229 aa  89  6e-17  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  26.8 
 
 
222 aa  88.6  7e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  26.09 
 
 
217 aa  88.2  1e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4894  transcriptional regulator, Crp family  26.73 
 
 
229 aa  87.8  1e-16  Bacillus cereus G9842  Bacteria  normal  0.0770605  normal  0.372037 
 
 
-
 
NC_011725  BCB4264_A0424  transcriptional regulator, Crp family  26.73 
 
 
229 aa  87.8  1e-16  Bacillus cereus B4264  Bacteria  hitchhiker  0.00556747  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  23.72 
 
 
231 aa  87  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  26.6 
 
 
348 aa  87  2e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  25.74 
 
 
233 aa  87  2e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  26.54 
 
 
232 aa  87  2e-16  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  25.74 
 
 
233 aa  87  2e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0352  CRP/FNR family transcriptional regulator  27.23 
 
 
229 aa  87  2e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.03 
 
 
242 aa  87  2e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009715  CCV52592_0436  transcription regulator  27.54 
 
 
214 aa  87.4  2e-16  Campylobacter curvus 525.92  Bacteria  normal  0.0316636  n/a   
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  27.14 
 
 
221 aa  87  2e-16  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  23.18 
 
 
232 aa  86.7  3e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  25.91 
 
 
225 aa  86.7  3e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  28.82 
 
 
232 aa  86.3  3e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  27.31 
 
 
253 aa  86.7  3e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  25.35 
 
 
218 aa  86.3  4e-16  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.34 
 
 
228 aa  85.1  8e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  27.78 
 
 
230 aa  85.1  9e-16  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  25.76 
 
 
354 aa  84.7  0.000000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  25.69 
 
 
225 aa  84.7  0.000000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  25.11 
 
 
225 aa  84.3  0.000000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  27.06 
 
 
244 aa  84.7  0.000000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  22.94 
 
 
234 aa  84.3  0.000000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  22.39 
 
 
232 aa  84.7  0.000000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  26.75 
 
 
225 aa  84.7  0.000000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  27.06 
 
 
244 aa  84.7  0.000000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  26.75 
 
 
225 aa  84.3  0.000000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25.7 
 
 
247 aa  84  0.000000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  26.58 
 
 
228 aa  83.6  0.000000000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  24.75 
 
 
233 aa  83.6  0.000000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  25.46 
 
 
249 aa  84  0.000000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  27.37 
 
 
230 aa  83.6  0.000000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0319  Crp/FNR family transcriptional regulator  27.57 
 
 
262 aa  83.6  0.000000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  25.68 
 
 
228 aa  83.6  0.000000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  26.61 
 
 
244 aa  83.2  0.000000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  27.1 
 
 
232 aa  83.6  0.000000000000003  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  27.62 
 
 
244 aa  82.8  0.000000000000004  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
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