Gene SYO3AOP1_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0465 
Symbol 
ID6331041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp480096 
End bp480767 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content27% 
IMG OID642656754 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001930660 
Protein GI188996409 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000196856 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG AAGACTTAAA GAATGCATAT CTATTTAGTC AGCTATCAGA AGAGACATTA 
AGAAAATTAG CAAGTATATC AAGAGTTAAA GAGTATGAAC CAGGTCAAGT TCTATTTTTT
GAAGGTGAAA AAGCTGAAAA TTTATATATT TTATTAGAAG GAAAATTAAA AGTTTACAAG
ACAACGTTTA AAGGAATAGA AGTTTTTATA AATCAATTTG GTCCTGTTAC TTTAATTGGT
GAAATGGCTA ATTTTGAAAA AGTTCCATAT CCGGCAACAG CAGAGTTTAT TACGGAAGGT
AAAGTTTTAA TTATAAACTT TAGAACCTTT GAAGAGGAAT TCCTAAAAAA TCCGGAAATT
TTGGTTTCAA TAATAAAATC TTTATCAAAT AAAATTAGAA TGTTAAATAA ATTCATAGAT
TCAACAGTAG TTCTTAGTGC CGATGCAAGA GTAGCAAAAC TGATTTTAGA AAGTCCGGAA
ATATTTGAAG TTTTAAAACA TAATCAAATA GCTTCTTTTT TAAACATTAC TCCAGAAACA
CTCTCAAGAG TTATTTCAAG ATTAAAACAA AAAGGAATTA TTTTTATCGA CGGAAGAAAG
ATTATCATAA AAGATAGAGA TAAACTTAAA AAAATTTCTA AGGATGAGCC TTTACTGCTA
AATAATACCT AA
 
Protein sequence
MNIEDLKNAY LFSQLSEETL RKLASISRVK EYEPGQVLFF EGEKAENLYI LLEGKLKVYK 
TTFKGIEVFI NQFGPVTLIG EMANFEKVPY PATAEFITEG KVLIINFRTF EEEFLKNPEI
LVSIIKSLSN KIRMLNKFID STVVLSADAR VAKLILESPE IFEVLKHNQI ASFLNITPET
LSRVISRLKQ KGIIFIDGRK IIIKDRDKLK KISKDEPLLL NNT