Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3406 |
Symbol | |
ID | 6780268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3922917 |
End bp | 3923600 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642769400 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002140195 |
Protein GI | 197119768 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.757412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA AAGACATCAT CAAGAAAGCG CTGCTGTTCT CGGGGCTGGA AGACGAATAT GTGGCGGAGG TAGCCGGCAT CGCCGTGCGT CGAGCCTTTG CCAAGGGAGA GACGCTGTTC ACCGAAGGGG AGAAGGCGGA GGGATTCTAC CTCCTCGCTT CGGGCGCGCT CAAGCTCTGC AAGATCTCCC CCGACGGCAG GGAGAAGGTG CTGCACATGG TGCACCCCAT CGAGACCTTC GCCGAGGCCG CTTTTTTCGG TGACGGCAAG TACCCGGCCG AGGCGCGCGG CGTCGAGAAA GGAGAGGTGC TCTTCTTCTC CAGGGGCTCG TTCATGGGCC TTTTGGAGCG CAACCCGCGG TTCTCGATGA ACCTGATCGC CTCGCTCTCC ATGCTGTTGC GCCGATTCGC GCACCAGATC GAGGAGCTTT CCTTCGCCGA CGCCCCCGCC AGGCTCGCCT CGTACCTTCT GGAACTCGCC TCCAGAAAGA GCACCAGTTA TCAAGGGAAA ACCTATCTGG AACTGGACAT GCGCAAGGGG GAGCTCGCCT CCCGCCTGGG CACCGTCAGC GAGACCCTCT CCCGCACCTT CAAAAAGATG AAGGACGAGG GGGTGATCGA AATGGATGGC AACAAGGTGA CCATAATGCA GATGGAAAAA TTGAGGATGA TCGCTGGGAA ATAA
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Protein sequence | MENKDIIKKA LLFSGLEDEY VAEVAGIAVR RAFAKGETLF TEGEKAEGFY LLASGALKLC KISPDGREKV LHMVHPIETF AEAAFFGDGK YPAEARGVEK GEVLFFSRGS FMGLLERNPR FSMNLIASLS MLLRRFAHQI EELSFADAPA RLASYLLELA SRKSTSYQGK TYLELDMRKG ELASRLGTVS ETLSRTFKKM KDEGVIEMDG NKVTIMQMEK LRMIAGK
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