Gene Gbem_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3406 
Symbol 
ID6780268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3922917 
End bp3923600 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID642769400 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002140195 
Protein GI197119768 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.757412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AAGACATCAT CAAGAAAGCG CTGCTGTTCT CGGGGCTGGA AGACGAATAT 
GTGGCGGAGG TAGCCGGCAT CGCCGTGCGT CGAGCCTTTG CCAAGGGAGA GACGCTGTTC
ACCGAAGGGG AGAAGGCGGA GGGATTCTAC CTCCTCGCTT CGGGCGCGCT CAAGCTCTGC
AAGATCTCCC CCGACGGCAG GGAGAAGGTG CTGCACATGG TGCACCCCAT CGAGACCTTC
GCCGAGGCCG CTTTTTTCGG TGACGGCAAG TACCCGGCCG AGGCGCGCGG CGTCGAGAAA
GGAGAGGTGC TCTTCTTCTC CAGGGGCTCG TTCATGGGCC TTTTGGAGCG CAACCCGCGG
TTCTCGATGA ACCTGATCGC CTCGCTCTCC ATGCTGTTGC GCCGATTCGC GCACCAGATC
GAGGAGCTTT CCTTCGCCGA CGCCCCCGCC AGGCTCGCCT CGTACCTTCT GGAACTCGCC
TCCAGAAAGA GCACCAGTTA TCAAGGGAAA ACCTATCTGG AACTGGACAT GCGCAAGGGG
GAGCTCGCCT CCCGCCTGGG CACCGTCAGC GAGACCCTCT CCCGCACCTT CAAAAAGATG
AAGGACGAGG GGGTGATCGA AATGGATGGC AACAAGGTGA CCATAATGCA GATGGAAAAA
TTGAGGATGA TCGCTGGGAA ATAA
 
Protein sequence
MENKDIIKKA LLFSGLEDEY VAEVAGIAVR RAFAKGETLF TEGEKAEGFY LLASGALKLC 
KISPDGREKV LHMVHPIETF AEAAFFGDGK YPAEARGVEK GEVLFFSRGS FMGLLERNPR
FSMNLIASLS MLLRRFAHQI EELSFADAPA RLASYLLELA SRKSTSYQGK TYLELDMRKG
ELASRLGTVS ETLSRTFKKM KDEGVIEMDG NKVTIMQMEK LRMIAGK