Gene Tbd_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0079 
Symbol 
ID3673278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp82263 
End bp82940 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID637708738 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_313837 
Protein GI74316097 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.849443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.162256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGG ACCCTGCGGA TATTGAAGTC CTGAAGGAAG GCTATCTGTT GGCGGCCCTG 
TCGCCACCCG AGTTCGATCA GGTATTGGCC CACGCCAGCG TCCGCAAGCT CGCGCCGAAC
GAGTGCCTGT TCGACCAGGG CGACCCGTGC ACGCATTTCT TTTTTGTCCT CTCCGGCATC
GTCAAGCTCT GCCGCGTCGC GCCGAGCGGC GAGGAGAAGG TGATGGATCT CGTGCGGCCC
GGCCATTACT TCGCCGAGGC CGTGATGTTC ATGGGTGGCC GCTACCCGGT ATACGCCCGC
GCGCTCGACG GAACCCGGCT CGTGGCGCTC GACAACAGGC ACTTTCTCGG CCTCCTCGGC
AGCAACCGCG ACCTCTGCAT GCGGCTGCTT TCGACCATGA GCCAGCGCAT CCACAGCCTG
ATCAACGAAA TCGACCACCT GACTTTGCAC AGTGGTGCCC AGCGCGTGAT CGGCTATCTG
CTCGAGCAGC TGCCCGACGG CGATGCGCCC GGCAGCGTCC GGCTCAGGGT GCCCAAGCAC
GTCATTGCGT CGCGGCTCGG CATCCAGCCC GAGACCTTGT CGCGGGTTCT GGCCAAGCTG
CGGACCGGGC ATCTGATCGA CGTCCACGAC GACATGATCG TCCTCAACGA CGTCGAAGCG
CTGCGGCGTT TGAGCTGA
 
Protein sequence
MNLDPADIEV LKEGYLLAAL SPPEFDQVLA HASVRKLAPN ECLFDQGDPC THFFFVLSGI 
VKLCRVAPSG EEKVMDLVRP GHYFAEAVMF MGGRYPVYAR ALDGTRLVAL DNRHFLGLLG
SNRDLCMRLL STMSQRIHSL INEIDHLTLH SGAQRVIGYL LEQLPDGDAP GSVRLRVPKH
VIASRLGIQP ETLSRVLAKL RTGHLIDVHD DMIVLNDVEA LRRLS