Gene Acid345_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0362 
Symbol 
ID4069604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp401800 
End bp402504 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID637982365 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_589441 
Protein GI94967393 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.74387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.571703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA ACAAAGTAGA TCCCGGCCAG GTGCTGCGAA AAGTACCGAT CTTCAGCGGC 
CTCAGTGATG TCGAATGGAA CGAGCTGTCG CAGCGCGTGG TTCCGCGCAA GTATCCCAAC
GGCGAAATGA TCTTCTCCGA GGGCGACGCC TGCGCCGGCT TGTTCGTGGT GCAGAGCGGC
CACATCCGCA TCTTCAAAAG TTCAGCCAGC GGACGCGAGC AGGTGCTCTC CATCGATGGC
CCCGGCAGTT CCGTCGCTGA GCTTCCAGTG TTCGATGGCG GCAGCTATCC CGCGTCGGCG
GTGGCCGTCA CCGACTGCAC CCTGCTCTTC CTCAGCAAAC AAGATTTCCA CGCGCTCTGC
ATGAAGTATC CCGAGATGGC GCTGAAAGTT CTCCGCGTCG TCGGCGGAAG ACTGCGCAGG
CTCGTCGGAA TTATTGAAGA ACTGTCGTTC ACGACAGTAC GGCATCGACT GGTGGCGCTG
TTGTTGCGTT TGGCGAAGAC CGAGGGCAAT AAAACCGAGC AGGGAATTAC CATCACCCTT
CCTGCCCACA ACCAGGAGCT AGCCGCGCAG ATCGGCACGG TGCGCGAATT GGTGTCGCGC
AACATGAGCC GTCTCCAGCA AGAAGGAATG ATCGAGCAGG ATGGGCGCAC GGTCATTCTC
AAAGATCCAA TGGGCTTGCA GCGAACGCTC GAAGAAGCGG GGTAG
 
Protein sequence
MSENKVDPGQ VLRKVPIFSG LSDVEWNELS QRVVPRKYPN GEMIFSEGDA CAGLFVVQSG 
HIRIFKSSAS GREQVLSIDG PGSSVAELPV FDGGSYPASA VAVTDCTLLF LSKQDFHALC
MKYPEMALKV LRVVGGRLRR LVGIIEELSF TTVRHRLVAL LLRLAKTEGN KTEQGITITL
PAHNQELAAQ IGTVRELVSR NMSRLQQEGM IEQDGRTVIL KDPMGLQRTL EEAG