Gene Psyr_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3425 
Symbol 
ID3368952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4089470 
End bp4090204 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content57% 
IMG OID637653776 
Productcyclic nucleotide-binding: regulatory protein, Crp 
Protein accessionYP_236495 
Protein GI66046654 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0533041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC CAGTCAAGTT GCGCGCTCAA ACCCAGGCTC ACTGCAAGGA TTGCAGTCTC 
GCGCCGTTGT GCCTGCCCCT TTCGTTAAAT ACCGAAGACA TGGACTGCCT TGACCAGATC
GTCAAACGCG GCCGGCCACT GAAGAAAGGC GAGTTTCTGT TTCGCCAGGG TGACACCTTC
GAGTCGGTCT ACGCGGTGCG TTCCGGGGCG TTGAAAACCT TCAATATCAG TGACAGCGGT
GAAGAACAAC TCACCGGCTT TCACCTGCCC AGCGAACTGG TAGGCATGTC CGGTATGGAC
GCCGAGGCTT ACCCGGTCTC GGCGCAGGCA CTGGAAACCA CATCGGTCTG CGAAATCCCT
TTCGAGCGCC TGGACGAGCT GTCCGTAAGA CTGCCGCAAC TGCGTCGGCA GTTGATGCGC
GTCATGAGCC GTGAGATCCG TGACGATCAG CAAATGATGC TGCTGCTGTC GAAAAAGACC
GCCGATGAGC GTATCGCCAC GTTTCTGATC AATCTGTCTG CACGCTTTCG CGCCAGAGGC
TTTTCGGCCA ATCAGTTCCG CCTGAGCATG TCGCGCAATG AAATCGGTAA TCACCTGGGT
CTGGCAGTCG AGACGGTGTC CCGTGTATTT ACCCGATTCC AGCAAAATCA GCTGATTTCT
GCCGAGGGCA AAGAGATACA CATCCTCGAC CCCATCGAGC TGTGTGCGCT GGCTGGCGGG
TCGATGCAAA GCTGA
 
Protein sequence
MSEPVKLRAQ TQAHCKDCSL APLCLPLSLN TEDMDCLDQI VKRGRPLKKG EFLFRQGDTF 
ESVYAVRSGA LKTFNISDSG EEQLTGFHLP SELVGMSGMD AEAYPVSAQA LETTSVCEIP
FERLDELSVR LPQLRRQLMR VMSREIRDDQ QMMLLLSKKT ADERIATFLI NLSARFRARG
FSANQFRLSM SRNEIGNHLG LAVETVSRVF TRFQQNQLIS AEGKEIHILD PIELCALAGG
SMQS