| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1603 |
|---|
| Symbol | |
|---|
| ID | 5193852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1794209 |
|---|
| End bp | 1794943 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640586073 |
|---|
| Product | CRP/FNR family transcriptional regulator |
|---|
| Protein accession | YP_001266943 |
|---|
| Protein GI | 148546841 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.138297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC CAGTCAAACT GCGCCCACAC AACCAGGCCC ATTGCAAGGA TTGCAGCCTG
GCCCCCCTGT GCCTGCCTCT TTCGCTGAAC CTGGAAGACA TGGACGCGCT GGATGAAATC
GTCAAACGCG GGCGGCCGCT CAAGAAAGGC GAGTTCCTGT TCCGCCAGGG TGACAGTTTT
GGCTCGGTCT ACGCAGTACG GTCCGGGGCC CTGAAAACCT TCAGCCTCAG CGACAGCGGC
GAAGAGCAGA TCACAGGCTT TCACCTGCCC AGCGAACTGG TCGGCCTGTC AGGCATGGAT
ACCGAGGCCT ACCCGGTATC GGCCCAGGCC CAGGAAACCA CTTCGGTGTG TGAAATCCCC
TTCGAGCGGC TGGACGAGCT GTCGGTACAG CTGCCACAGC TACGCCGCCA GCTGATGCGG
GTGATGAGCC GCGAAATCCG CGACGACCAG CAAATGATGC TGCTGCTGTC GAAAAAAACC
GCCGACGAGC GCATTGCCAC TTTCCTGGTC AACCTGTCGG CGCGCTTCCG TGCCCGTGGC
TATTCGGCCA ACCAGTTCCG CCTGAGCATG TCGCGCAACG AAATCGGCAA CTACCTTGGC
CTGGCGGTAG AAACCGTGTC GCGGGTGTTC ACCCGCTTCC AGCAGAACGG CCTGCTGCGC
GCCGAGGGCA AGGAAGTGCA CATCCTCGAC CCGATCCAGC TGTGCGCGCT GGCCGGTGGT
GCAATCGAGG CCTGA
|
|---|
| Protein sequence | MSEPVKLRPH NQAHCKDCSL APLCLPLSLN LEDMDALDEI VKRGRPLKKG EFLFRQGDSF
GSVYAVRSGA LKTFSLSDSG EEQITGFHLP SELVGLSGMD TEAYPVSAQA QETTSVCEIP
FERLDELSVQ LPQLRRQLMR VMSREIRDDQ QMMLLLSKKT ADERIATFLV NLSARFRARG
YSANQFRLSM SRNEIGNYLG LAVETVSRVF TRFQQNGLLR AEGKEVHILD PIQLCALAGG
AIEA
|
|---|
| |