Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0349 |
Symbol | |
ID | 6743143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 306675 |
End bp | 307334 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642750142 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002121017 |
Protein GI | 195952727 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000181532 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTTG ATATAGATTT GCTAAGAAAT GTTTACTTAT TTAGTAAAGT AAGCGACGAA AATCTTAAAA AACTAAAAAG CATATCAAAT ATAAGAAATT TCAAGAAGGG CGAGATCGTA TTTCACGAGG GAGACAAGCC TGAAAACATA TATATATTGC TAGATGGCTT AGTGAAAGTG TATAAGCTTA CAAACAAAGG CACAGAAGTC GTAATAACGC AGTTTAAACC AGTAAGCATC ATTGGTGAAA TGGCAAACTT TGAAAATATA TCATATCCAG CTACTGCTGA ATTCATAACA GAAGGTCAGG TATTGCAAAT AGATTTTGAA GCCTTTAAAA GAGAATTTAT GACATCTCCT GAAATATTGT TATCTATAAT AAAATCCTTG TTGATGAAGA TAAGAACTTT AGATTTATTC ATAACTACAA ATATGGTAAT GAGCGCAGAG GAAAGAGTGG CAAAGATAAT AATGGAATCT CCGGAGATTT TTACATCGCT AAAACATTCA CAAATAGCTT CTTTACTAAA TATAGCTCCA GAAACGTTAT CCAGAATCAT CTCAAAGTTT AAACAAAATG GAGCAATACA TGTAGATGAA AAACATCGCA TTGTGGTAAA GGATATTGCT AAGCTTAAAG ATGTTATTTA TAACTTTTAA
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Protein sequence | MNVDIDLLRN VYLFSKVSDE NLKKLKSISN IRNFKKGEIV FHEGDKPENI YILLDGLVKV YKLTNKGTEV VITQFKPVSI IGEMANFENI SYPATAEFIT EGQVLQIDFE AFKREFMTSP EILLSIIKSL LMKIRTLDLF ITTNMVMSAE ERVAKIIMES PEIFTSLKHS QIASLLNIAP ETLSRIISKF KQNGAIHVDE KHRIVVKDIA KLKDVIYNF
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