Gene Ava_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3066 
Symbol 
ID3681046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3802223 
End bp3802921 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content44% 
IMG OID637718411 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_323570 
Protein GI75909274 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACC GATATAGCTT GCAGTCACCT GCTAATCCTT GGATGATCTC GGCTCCCTTT 
TTTCAAGGGC TACCAGAAAC TGCTGTAGAA TTAGCCCTCA ATCACCTTGT CACTCGTACA
CACCCAGCTA ATCAGGTCAT ACTACTAGAA AACGACTGGG GCGGCTCTGT ATATTTTATA
GTCGAAGGTT GGGTAAAAAT CCGTACTTAT AATCTCGAAG GGAAAGAGGT GACATTGAAT
ATTCTGGGTA CGGGAGAATT GTTTGGTGAA ATGGCAGCAC TAGATGAAGT ACCTCGATCC
ACTGATGTAA TTACTTTGAC TACCACGATG ATTGGTAGTA TGCCTTCTCA AGATTTTGTC
AAGTTACTAC ATACAGAACC TTTGGCGGGA GTGCGTTTAT CTCAGTTGAT GGCTCGGCGC
TTGCGACAAG TAAATCGGCG TTTGCGACTG CGGGAATCTG ATAGTCAGTC GCGGGTAGCA
GACACTTTGC TGTTTTTAGC GGAAGGTCAA GGAAAACGAG GACAAACCGG AACGGAACTC
CCTAATTTAC CTCATCGAGA GCTAAGTAGT TTGAGCGGGT TGGCACGAGA AACTGTTACC
AGGGTATTGA CAAGGTTAGA AAAAAAAGGC TTGATTAAGC GAGATCAAGA CACTATTTGT
ATTCCAGATT TGTCAGCCTT AGAGAAAATG TTAATTTAA
 
Protein sequence
MEDRYSLQSP ANPWMISAPF FQGLPETAVE LALNHLVTRT HPANQVILLE NDWGGSVYFI 
VEGWVKIRTY NLEGKEVTLN ILGTGELFGE MAALDEVPRS TDVITLTTTM IGSMPSQDFV
KLLHTEPLAG VRLSQLMARR LRQVNRRLRL RESDSQSRVA DTLLFLAEGQ GKRGQTGTEL
PNLPHRELSS LSGLARETVT RVLTRLEKKG LIKRDQDTIC IPDLSALEKM LI