| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5316 |
|---|
| Symbol | |
|---|
| ID | 8228927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6417898 |
|---|
| End bp | 6418962 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644933161 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003089674 |
|---|
| Protein GI | 255039053 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.100222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAACGA GAAAGATACT TTTGATTGAA GACAACCCCG AAATGCGGGA GAATACGGCC
GAGATCCTCG AACTTGCCAA CTACGAGGTA CTAACCGCCC AAAATGGCAA AGAAGGCGTT
CAGCAAGCTT CCCAGCACCT CCCCGATCTC ATCATCTGCG ATATTATGAT GCCCGAACTG
GACGGCTACG GCGTGCTGCA CATGCTGGGC AAGGACGAGC GCACGGCATC CGTTCCATTC
ATCTTCCTCA CCGCCAAGGC AGAGAAGGAA GATTACCGCA AGGGCATGAC CATGGGCGCG
GACGATTACC TCACCAAGCC CTATGACGAC GTGGAACTAC TCAACGCCGT CGAAATGCGT
CTCAAAAAGA GCGACCGGCT GAAAAAGCAA TTCGAACGGT CAGCCGAAGG CCTGGATCAG
TTCATTAAAG AAGCGCAGGC ATTCGACCCG ATCGTGAAGC TGGCGGAAGA TAAGAAGGTC
AAGATTTTGC GTAAAAAGGA AACGATTTAT ACCGAAGGCA GCTTTCCGTC CCACGTTTTT
TTCCTCCAAA AAGGAAAGGT AAAAGCCTAT AAATCAAATG AAAACGGGAA AGAATACATT
ACCGACCTGC TGAAAGAAGG TGAATTCTTC GGCTATCTCG ACCTTTTGCA CGGCGCCCCT
TATGAAGAAA CGGCCATTGC GCTGGAAAAA TCGGAGGTGG CAATGATCCC GAAGGATGAC
TTCTTCAACC TGCTGCAAGG CAACCGCGAA GTGGCTTCCA AGTTCATCCG GATGCTTTCC
AACGAAATCA AGGAACGGGA AGAGCGACTT TTGCAGCTGG CCTACAATTC GGTTCGCAAG
CGTGTGGCGC AGGCGCTGGT AATGCTGGTG CAGCGCTACC AGGAAGACCG TTCGAAACCG
TTTTCGATGG CCGTCACCCG CGAAGATATC GCTTCCATGG TAGGTACCGC CACCGAAACG
GTGATCCGGA CGCTTTCAGA TTTCAAGGAA GAACGCCTTG TGGATATGAA AGGCAGCCAG
ATCACCGTGT TGGAATATGA AAAACTAGCC CGGATGCGCA ATTAG
|
|---|
| Protein sequence | METRKILLIE DNPEMRENTA EILELANYEV LTAQNGKEGV QQASQHLPDL IICDIMMPEL
DGYGVLHMLG KDERTASVPF IFLTAKAEKE DYRKGMTMGA DDYLTKPYDD VELLNAVEMR
LKKSDRLKKQ FERSAEGLDQ FIKEAQAFDP IVKLAEDKKV KILRKKETIY TEGSFPSHVF
FLQKGKVKAY KSNENGKEYI TDLLKEGEFF GYLDLLHGAP YEETAIALEK SEVAMIPKDD
FFNLLQGNRE VASKFIRMLS NEIKEREERL LQLAYNSVRK RVAQALVMLV QRYQEDRSKP
FSMAVTREDI ASMVGTATET VIRTLSDFKE ERLVDMKGSQ ITVLEYEKLA RMRN
|
|---|
| |