More than 300 homologs were found in PanDaTox collection
for query gene HY04AAS1_0349 on replicon NC_011126
Organism: Hydrogenobaculum sp. Y04AAS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  100 
 
 
219 aa  437  9.999999999999999e-123  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  59.15 
 
 
223 aa  253  1.0000000000000001e-66  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_013512  Sdel_0691  cyclic nucleotide-binding protein  46.12 
 
 
212 aa  200  9.999999999999999e-51  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0798  transcription regulator  42.72 
 
 
213 aa  195  4.0000000000000005e-49  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.00000000000892201  n/a   
 
 
-
 
NC_009802  CCC13826_1550  protein YieJ  41.31 
 
 
212 aa  189  2e-47  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0436  transcription regulator  39.34 
 
 
214 aa  174  9e-43  Campylobacter curvus 525.92  Bacteria  normal  0.0316636  n/a   
 
 
-
 
NC_007575  Suden_1312  CRP/FNR family transcriptional regulator  40.51 
 
 
209 aa  158  8e-38  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000433355  n/a   
 
 
-
 
NC_009714  CHAB381_1382  transcription regulator  32.04 
 
 
213 aa  133  1.9999999999999998e-30  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0689  conserved hypothetical protein, putative transcriptional regulator  34.83 
 
 
200 aa  120  9.999999999999999e-27  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1512  cyclic nucleotide-binding domain-containing protein  31.25 
 
 
221 aa  114  2.0000000000000002e-24  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00000347396  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  32.24 
 
 
219 aa  108  6e-23  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_013512  Sdel_0710  cyclic nucleotide-binding protein  29.13 
 
 
221 aa  107  1e-22  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000071434  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  31.51 
 
 
226 aa  102  7e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  31.76 
 
 
198 aa  100  2e-20  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_008787  CJJ81176_0491  putative transcriptional regulator  31.76 
 
 
201 aa  99.4  4e-20  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.0132873  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  28.57 
 
 
225 aa  99  5e-20  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  32.31 
 
 
198 aa  98.6  7e-20  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  30.59 
 
 
243 aa  98.2  9e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  29.68 
 
 
227 aa  97.1  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  29.68 
 
 
227 aa  96.7  3e-19  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  30.59 
 
 
241 aa  95.5  5e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  30.94 
 
 
229 aa  95.1  6e-19  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  30.32 
 
 
230 aa  95.1  8e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.57 
 
 
225 aa  95.1  8e-19  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  29.15 
 
 
231 aa  94.7  9e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.93 
 
 
229 aa  94.4  1e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  28.63 
 
 
226 aa  94.4  1e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  28.25 
 
 
229 aa  94  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  30.57 
 
 
227 aa  93.2  3e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  26.46 
 
 
236 aa  92.4  5e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1296  CRP/FNR family transcriptional regulator  27.41 
 
 
218 aa  92  7e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00112875  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  24.88 
 
 
224 aa  91.7  9e-18  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  26.64 
 
 
230 aa  90.9  1e-17  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  23.98 
 
 
225 aa  90.9  1e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  26.64 
 
 
230 aa  90.5  2e-17  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  28.86 
 
 
248 aa  90.9  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  26.48 
 
 
228 aa  90.1  2e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  27.18 
 
 
230 aa  89.7  3e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.87 
 
 
229 aa  89.4  4e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  26.05 
 
 
227 aa  89.4  4e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  26.8 
 
 
226 aa  88.6  7e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  23.87 
 
 
225 aa  87.4  1e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.23 
 
 
231 aa  87.4  1e-16  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  24.32 
 
 
225 aa  87.8  1e-16  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  21.62 
 
 
228 aa  87.4  2e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  23.87 
 
 
225 aa  86.7  2e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  31.65 
 
 
227 aa  87  2e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  23.66 
 
 
231 aa  86.7  2e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  22.83 
 
 
236 aa  86.7  3e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  24.42 
 
 
222 aa  86.3  4e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.34 
 
 
225 aa  85.9  4e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  23.15 
 
 
257 aa  85.9  5e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  27.4 
 
 
224 aa  85.5  5e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  29.9 
 
 
228 aa  84.7  9e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  28.9 
 
 
254 aa  84.3  0.000000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  27.75 
 
 
222 aa  83.6  0.000000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  28.5 
 
 
222 aa  84  0.000000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  28.5 
 
 
222 aa  84  0.000000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011662  Tmz1t_4014  transcriptional regulator, Crp/Fnr family  28.34 
 
 
233 aa  83.2  0.000000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  24.23 
 
 
226 aa  83.2  0.000000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  25.89 
 
 
227 aa  83.2  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  25.89 
 
 
223 aa  83.2  0.000000000000003  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  24.88 
 
 
227 aa  82.8  0.000000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  26.03 
 
 
234 aa  82  0.000000000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  28.5 
 
 
236 aa  82  0.000000000000006  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  27.23 
 
 
232 aa  82  0.000000000000006  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  26.64 
 
 
239 aa  82  0.000000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  21.56 
 
 
224 aa  81.6  0.000000000000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  23.21 
 
 
226 aa  80.9  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  24.32 
 
 
231 aa  80.1  0.00000000000002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  21.97 
 
 
231 aa  80.5  0.00000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  23.5 
 
 
220 aa  80.1  0.00000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  24.32 
 
 
231 aa  80.1  0.00000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  23.11 
 
 
222 aa  80.9  0.00000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  23.58 
 
 
239 aa  80.5  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  23.18 
 
 
228 aa  80.1  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  27.36 
 
 
229 aa  79.7  0.00000000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  25 
 
 
249 aa  79.7  0.00000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  25.84 
 
 
225 aa  79.3  0.00000000000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  27.36 
 
 
246 aa  79.3  0.00000000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  25.84 
 
 
225 aa  79.3  0.00000000000004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  22.27 
 
 
228 aa  79.3  0.00000000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  24.37 
 
 
254 aa  79  0.00000000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_007517  Gmet_0750  Crp/FNR family transcriptional regulator  25.82 
 
 
238 aa  79  0.00000000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  28.04 
 
 
236 aa  79  0.00000000000005  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  23.32 
 
 
227 aa  78.6  0.00000000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  25.84 
 
 
233 aa  78.6  0.00000000000007  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  25.57 
 
 
236 aa  78.2  0.00000000000009  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  26.15 
 
 
237 aa  77.8  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  25.57 
 
 
236 aa  78.2  0.0000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  25.94 
 
 
226 aa  77  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  23 
 
 
261 aa  77.4  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  25.79 
 
 
234 aa  77  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  26.73 
 
 
229 aa  77.4  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  26.5 
 
 
230 aa  77  0.0000000000002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  24.14 
 
 
241 aa  77  0.0000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  23.85 
 
 
225 aa  76.3  0.0000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  23 
 
 
226 aa  76.6  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  22.43 
 
 
228 aa  76.6  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_013172  Bfae_24470  cAMP-binding protein  22.77 
 
 
261 aa  75.9  0.0000000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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