Gene Sden_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3444 
Symbol 
ID4019992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4116676 
End bp4117428 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content42% 
IMG OID637957496 
Productcyclic nucleotide-binding 
Protein accessionYP_564442 
Protein GI91794791 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCGA ATCAAAATGT GAGAGCTAGG GTGCAAAATC ACCAGCTCTT TTCTTCACTG 
AATGAGGCTC AGCTAGCTAA AATTTTTGCT ACTGCTAGTC TTCTGCATAT CAAGCCTGAA
CAAATGCTGT TTCATCAAGG TGAGTTAGCA AGCCGTTTTT ATTTTGTCTT GGCTGGAACC
CTACAGCTGT TTCGAACTAA TGTTCAAGGA CAAATGAAGG TTATCGAGGT GGTGCGTAGC
GGTTGCACAT TTGCAGAAGC ACTCATGTTT AATAAGCAAA CTCGCTTTCC TGTATCGGCT
CAATCTGTGT CTGAGTGTGC TCTCGTAAGT TTTGATAGCG AGACTTATTT GCAGTTACTG
AAACACAATC CCGATGCTTG CATCGCCATT ATGGCTGATT TAAGTGTACG TATCCGTAAG
CACATTAATG AAGTCGAAAT GGTGTCGTTG CAGAATGCTC AGCATAGGTT ATTGCTATTT
TTACTCCGAA AGATGACCGT AGTTGGAGAT AACCAAGGCG AAATTACTTT GGATATTCCT
AAACGTTTAC TGGCATCCCG TCTTTCTATT CAGCCTGAGA CTTTCTCACG TTTGATTAAA
AAAATGTCTC AAACTGGGCT CATTGCTGAG TCGCATGGGG TTATTCGTAT TCCTGATGTG
GCACTGCTTT ATGCCAGCAC AGATATTTCA ATAACCCAGC CGACTTTCAA TCAACAAGGG
CCGAGCAGTG CTATTCCCCT AGTCTGCAAT TAA
 
Protein sequence
MLANQNVRAR VQNHQLFSSL NEAQLAKIFA TASLLHIKPE QMLFHQGELA SRFYFVLAGT 
LQLFRTNVQG QMKVIEVVRS GCTFAEALMF NKQTRFPVSA QSVSECALVS FDSETYLQLL
KHNPDACIAI MADLSVRIRK HINEVEMVSL QNAQHRLLLF LLRKMTVVGD NQGEITLDIP
KRLLASRLSI QPETFSRLIK KMSQTGLIAE SHGVIRIPDV ALLYASTDIS ITQPTFNQQG
PSSAIPLVCN