More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_0460 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  100 
 
 
232 aa  475  1e-133  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009092  Shew_3331  Crp/FNR family transcriptional regulator  42.44 
 
 
258 aa  160  2e-38  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  40.27 
 
 
225 aa  159  3e-38  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  41.26 
 
 
272 aa  159  5e-38  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  43.46 
 
 
243 aa  149  5e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  38.43 
 
 
239 aa  148  6e-35  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  41.9 
 
 
227 aa  147  2.0000000000000003e-34  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  36.67 
 
 
250 aa  146  3e-34  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  40.19 
 
 
237 aa  132  3.9999999999999996e-30  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  34.56 
 
 
229 aa  131  9e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  35.05 
 
 
241 aa  130  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  40.1 
 
 
232 aa  131  1.0000000000000001e-29  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  39.81 
 
 
234 aa  130  2.0000000000000002e-29  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  36.59 
 
 
227 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  36.59 
 
 
227 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  36.65 
 
 
229 aa  130  2.0000000000000002e-29  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  36.65 
 
 
246 aa  130  2.0000000000000002e-29  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  35.34 
 
 
238 aa  128  9.000000000000001e-29  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  34.1 
 
 
230 aa  127  1.0000000000000001e-28  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  35.68 
 
 
229 aa  126  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  35.55 
 
 
229 aa  125  5e-28  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  32.88 
 
 
249 aa  124  1e-27  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  33.64 
 
 
227 aa  122  3e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  33.65 
 
 
227 aa  121  9e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  31.55 
 
 
236 aa  120  1.9999999999999998e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  34.87 
 
 
254 aa  119  3.9999999999999996e-26  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  32.11 
 
 
222 aa  119  6e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  32.11 
 
 
222 aa  119  6e-26  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  35.71 
 
 
231 aa  115  5e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  34.8 
 
 
229 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  34.8 
 
 
230 aa  114  2.0000000000000002e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  34.8 
 
 
229 aa  114  2.0000000000000002e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  34.8 
 
 
229 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  34.8 
 
 
229 aa  113  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  34.8 
 
 
230 aa  114  2.0000000000000002e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  34.8 
 
 
230 aa  114  2.0000000000000002e-24  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  34.8 
 
 
230 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  31.25 
 
 
229 aa  111  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  33.64 
 
 
253 aa  110  3e-23  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  33.33 
 
 
245 aa  108  8.000000000000001e-23  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  31.86 
 
 
233 aa  107  1e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  35.2 
 
 
236 aa  107  1e-22  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  30.92 
 
 
231 aa  107  2e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  31.13 
 
 
228 aa  106  3e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  32.88 
 
 
252 aa  105  9e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  30.52 
 
 
227 aa  104  1e-21  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  33.33 
 
 
225 aa  104  2e-21  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  33.33 
 
 
225 aa  104  2e-21  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  34.13 
 
 
221 aa  102  4e-21  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  31.48 
 
 
229 aa  101  8e-21  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  34.95 
 
 
225 aa  101  9e-21  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_007643  Rru_A2636  Crp/FNR family transcriptional regulator  35.27 
 
 
234 aa  100  1e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  29.69 
 
 
226 aa  101  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  28.16 
 
 
224 aa  100  2e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  33.65 
 
 
246 aa  99.8  3e-20  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  31.67 
 
 
228 aa  99.8  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  34.03 
 
 
254 aa  99.4  4e-20  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  31.88 
 
 
249 aa  99.4  4e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  30.33 
 
 
227 aa  99.4  5e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  30.05 
 
 
227 aa  99  5e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  27.65 
 
 
243 aa  98.6  8e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  32.18 
 
 
255 aa  98.6  8e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02297  transcription regulator protein  31.56 
 
 
225 aa  97.4  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  32.7 
 
 
254 aa  97.1  2e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  31.61 
 
 
241 aa  97.1  2e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  32.7 
 
 
254 aa  97.1  2e-19  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  33.5 
 
 
225 aa  96.3  3e-19  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  32.24 
 
 
222 aa  96.3  4e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  30.46 
 
 
241 aa  96.3  4e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  32.95 
 
 
222 aa  95.9  5e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  26.94 
 
 
226 aa  95.5  6e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  30.7 
 
 
241 aa  95.1  8e-19  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.37 
 
 
237 aa  94.4  1e-18  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  30.05 
 
 
227 aa  94.7  1e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  27.1 
 
 
230 aa  94.7  1e-18  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  29.44 
 
 
248 aa  94  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  29.15 
 
 
222 aa  92.8  4e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  28.7 
 
 
234 aa  92.8  4e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  27.89 
 
 
240 aa  92.4  5e-18  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  28.33 
 
 
221 aa  92  7e-18  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  25.48 
 
 
219 aa  91.3  1e-17  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  29.73 
 
 
225 aa  90.5  2e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  27.23 
 
 
226 aa  89  5e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  27.09 
 
 
227 aa  89  6e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2638  transcriptional regulator, Crp/Fnr family  33.15 
 
 
222 aa  87.8  1e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  30 
 
 
234 aa  87.8  1e-16  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.77 
 
 
225 aa  87.8  1e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  31.16 
 
 
223 aa  87.8  1e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_012850  Rleg_3301  transcriptional regulator, Crp/Fnr family  30.17 
 
 
227 aa  87  2e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306356 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  27.78 
 
 
236 aa  87.4  2e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3466  regulator of Biofilm formation Fnr Family  28.85 
 
 
235 aa  85.1  8e-16  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  28.06 
 
 
238 aa  84.7  0.000000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_007413  Ava_3340  Crp/FNR family transcriptional regulator  29.9 
 
 
207 aa  84  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0648445 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30 
 
 
224 aa  83.2  0.000000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  27.6 
 
 
352 aa  83.2  0.000000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  25.71 
 
 
225 aa  83.2  0.000000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  30.16 
 
 
244 aa  82.8  0.000000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  28.42 
 
 
238 aa  82.8  0.000000000000004  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  27.7 
 
 
224 aa  82.4  0.000000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  26.64 
 
 
230 aa  82.4  0.000000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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