Gene Pden_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2478 
Symbol 
ID4580116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2494525 
End bp2495274 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID639769807 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_916261 
Protein GI119385205 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.651433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACGCA CGGTCTTTTC CTTGCGCGCC GCTCGTGCCA CACTCGGGCC GCGCGAAACC 
AAGGATGAGG CTCCGATGAA CGCCCCCCTG CCCGAGGCGG TGAAGAAGTC CGTTCTGCTG
AACGGACTGA CCCCCGAGAT GCGCGACAAG CTGCTGAAGG ACGCCCAGCG GCGCAGCTAT
CGCGAGGGCG AGACCATCTT TTTGCAGGGC GATCCGGCGC GGGCGGTGTT TATCGTCCTG
AACGGCTTCA TCAAGCTGTC GCGGCTGACG CCGAACGGTT CCGAGGCGGT GGTGGCGATC
CTGGGCCGCA ACCGCAGCTT TGCCGAGGCG ATGGTGCTGC GCGGCACGCC CTATCCGGTC
TCGGCCGAGG CGATCTCGGA CTGCACGGTC CTGCAGATCG ACGGGGCGCG GCTGCGGCAG
TTCCTGCTGG AGAACCAGGA ATTCGCCATC GGGCTTCTGG CCTCGACCTT CGTGCATCTG
CAAGGGCTGG TGGACCAGAT CGAAAGGCTC AAGGCCCATA CCGGAGTGCA GCGCGTGGCG
CAGTTCCTGG CCGACCTCTC CGATGCCGTG GCCGGCCCGG CCGAGGTGCG CCTGCCCTAT
AACAAGCGGC TGATCGCAGG GCATCTGGGC ATGCAGCCCG AAAGCTTGTC GCGCGCCTTT
GCCCGGCTGC GCAAGCATGG GGTCGAGATC GAGGCCGACA AGGCCATGAT CGCCGATATC
GCCGAATTGC GCATGATGGC CATGGATTGA
 
Protein sequence
MERTVFSLRA ARATLGPRET KDEAPMNAPL PEAVKKSVLL NGLTPEMRDK LLKDAQRRSY 
REGETIFLQG DPARAVFIVL NGFIKLSRLT PNGSEAVVAI LGRNRSFAEA MVLRGTPYPV
SAEAISDCTV LQIDGARLRQ FLLENQEFAI GLLASTFVHL QGLVDQIERL KAHTGVQRVA
QFLADLSDAV AGPAEVRLPY NKRLIAGHLG MQPESLSRAF ARLRKHGVEI EADKAMIADI
AELRMMAMD