| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1785 |
|---|
| Symbol | |
|---|
| ID | 8019441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1906938 |
|---|
| End bp | 1907615 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830569 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_002981739 |
|---|
| Protein GI | 241663379 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0232074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.813169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACC CCCTCAATGT GGGCGATCTG CTCAAGCACA GCCCGCTGTT CCTGGACTTC
GACAACGATG ACATTGCCTT GCTCGCGCGC GACAGCCACG CAGTGCGCGT GTCGCGGCAC
GACTTCGCGT TTCGCCGTGG CGACCACGCC GATGGCTTCT TTGTCGTGGT GGTCGGTGCG
ATCAAACTCG TATTGCCGGG GGCGCACGGC CAATGCAAGG TCATCGAGTT CTTCGGGCCC
GGCGAGTGCT TTGGTGAGCC CTTCATGTTT CTGAACCGCC CCTACGCGGC AGATGCGCAA
GCCATGGAAG ACAGCCTGCT TGTCTGGATC GGTAAGCGCG CCGTCGACGA TGCACTCCAC
GTGCATCCGC GCCTGGCGCG GCAGATGTTG ACGGGGCTGT CCACCCGCCT GCACACGCTG
ATGTGCGACA TCGAAACCGT GAACCTGCAA AGCGCCAATG AACGGCTGAT CGGCTATCTG
CTCTCGCTGC CGCGCAAGTT TGATCGCACG CGGTTTCCAT GCAGCAAGAG TCTGGTCGCG
TCCAAGCTCG GGCTGGCACC GGCCACGCTT TCCCGCACGC TGCGACAGTT GATTCGCGAC
GGGTTGATCC GCGTGGAAGG CCGCGAGGTC GTGATCCAAA ACACCACGGC GTTGCAGCGT
CAGCTCATGG CGGGATAG
|
|---|
| Protein sequence | MQDPLNVGDL LKHSPLFLDF DNDDIALLAR DSHAVRVSRH DFAFRRGDHA DGFFVVVVGA
IKLVLPGAHG QCKVIEFFGP GECFGEPFMF LNRPYAADAQ AMEDSLLVWI GKRAVDDALH
VHPRLARQML TGLSTRLHTL MCDIETVNLQ SANERLIGYL LSLPRKFDRT RFPCSKSLVA
SKLGLAPATL SRTLRQLIRD GLIRVEGREV VIQNTTALQR QLMAG
|
|---|
| |