Gene Mmc1_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1531 
Symbol 
ID4482856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1880505 
End bp1881224 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID639722273 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_865446 
Protein GI117924829 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.169257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGT GGCGGCAGCA GGTTTTTCAA GATCCGGTTT TTTCGCAAAG CCCCCTTTTT 
ACGGCGCTGA CTTTACCGCA ACGGTCGTTT CTTGAACCAA CGGTGGAGCG CTTAAAGCTG
AATAAAAAAG AGGTGCTGTT CCATGAAGGG CAACCCGCGA GCCATTTTTT TATTGTGCGC
AAGGGTTTGA TCAAACTTTT GCGCCTTTCT CAAAATGGCC GTGAAAAGGT GCTTGAGATT
ATTCGCCCAG GGGACTATAT CGCTTTGCCG CTGATGTTTT TAAACCACCC CAGCTACCCT
GTCACCGCAG AAGCCCTGCA AACCAGCGAG ATCTACCAAC TGCCCAATGC CCCTTTTATG
GAGATGTTGT ACCAATCTCA GGAGACCTGC TTTCGTATCA TGGCCGCGCT CTCAATGCGG
ATGCACGTGT TGGTGGCAGA GATTGAAAGT TTAAGCCTGA AAAATGCGCC ACAGCGATTT
ATTGATTATC TGTTGGAGCG TTTAGATGAG GATATGCTGG TACGCAATCA AGGTGTGGTA
TCGCTGGGTA TGCCTAAGCA CGTGCTGGCT TCTAAACTCT CTATTAAGCC TGAGTCTCTC
TCACGCCTAA TGCGGCGTTT GAGTGATGAT GGGTTAATCC TCGTGCAGCA CACCGATATC
CACATTCTTG ATTGCCGCAC CTTGCGTGAT GCCAGCTATA GCTTAGGTGA TACGCACTAA
 
Protein sequence
MQAWRQQVFQ DPVFSQSPLF TALTLPQRSF LEPTVERLKL NKKEVLFHEG QPASHFFIVR 
KGLIKLLRLS QNGREKVLEI IRPGDYIALP LMFLNHPSYP VTAEALQTSE IYQLPNAPFM
EMLYQSQETC FRIMAALSMR MHVLVAEIES LSLKNAPQRF IDYLLERLDE DMLVRNQGVV
SLGMPKHVLA SKLSIKPESL SRLMRRLSDD GLILVQHTDI HILDCRTLRD ASYSLGDTH