Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4660 |
Symbol | |
ID | 6284920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 990801 |
End bp | 991478 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619137 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_001893172 |
Protein GI | 187926827 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA CTCTCGATAT TGGCAACCTG CTCAAGCACA CCCGGTTGTT CGAGGACTTT GACGCCGACG ACATGGCGGT CCTCGCACGC GATTGCCGCA CACAGCGCGT TGCACGTCAC GATATTGTTT TCAACCGCGG CGACCATGCC GACGGCTTCT ATGTGGTAGC GGTAGGCGCG ATCAAACTCG TGCTGCCCGG TCCGCATGGA CAGCGCAAGG TCATCGAATT CTTTGGTCCG GGCCAGTGTT TTGGCGAGCC GTTCATGTTC ATCAACCGGC CGTATGCAGC CGATGCCCAG GCCATGGAAG ACAGCCTGCT CGTCTGGATC GGCAAGCCGG CCATCGACGC TGCGCTCGAC GTGCATCCGC ACCTGGCGCG GCAGATGCTT GCGGGTCTGT CTGCCCGGCT GCACACCCTG ATGTGCGACA TCGAAACGGT CAAGCTGCAA AGCGCAAACG AACGGCTGGT CGGCTATCTG CTCTCGCTGC CGCGCAAGTT CGACCGGACG CGTTTTCCGT GCAGCAAGAG CCTGGTGGCG TCCAAGCTCG GGCTGGCACC CGCCACGCTC TCGCGCGTGC TGCGTCAATT GATTCAGGAC GGACTCATCC TGGTCGAGGG GCGGGATGTC GTCATCCCCA ACTCCGTGGC GCTTGAGCGC CAACTGCAGG CCGCATAG
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Protein sequence | MAETLDIGNL LKHTRLFEDF DADDMAVLAR DCRTQRVARH DIVFNRGDHA DGFYVVAVGA IKLVLPGPHG QRKVIEFFGP GQCFGEPFMF INRPYAADAQ AMEDSLLVWI GKPAIDAALD VHPHLARQML AGLSARLHTL MCDIETVKLQ SANERLVGYL LSLPRKFDRT RFPCSKSLVA SKLGLAPATL SRVLRQLIQD GLILVEGRDV VIPNSVALER QLQAA
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