More than 300 homologs were found in PanDaTox collection
for query gene Ava_3340 on replicon NC_007413
Organism: Anabaena variabilis ATCC 29413



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007413  Ava_3340  Crp/FNR family transcriptional regulator  100 
 
 
207 aa  424  1e-118  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0648445 
 
 
-
 
NC_011729  PCC7424_3735  transcriptional regulator, Crp/Fnr family  38.69 
 
 
210 aa  145  5e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  36.11 
 
 
222 aa  84  0.000000000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  29.78 
 
 
254 aa  84.3  0.000000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  36.11 
 
 
222 aa  84  0.000000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  29.9 
 
 
232 aa  84  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  30.16 
 
 
272 aa  80.5  0.00000000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0642  putative transcriptional regulator, Crp/Fnr family  28.05 
 
 
231 aa  77.8  0.0000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009955  Dshi_3764  cyclic nucleotide-binding protein  33.71 
 
 
188 aa  77  0.0000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.116438  normal  0.259153 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  29.95 
 
 
231 aa  76.6  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_009957  Dshi_4040  cyclic nucleotide-binding protein  33.71 
 
 
188 aa  77  0.0000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.417397  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  29.05 
 
 
238 aa  74.3  0.000000000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  27.12 
 
 
214 aa  73.9  0.000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  26.78 
 
 
248 aa  73.6  0.000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  32.02 
 
 
229 aa  73.2  0.000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3331  Crp/FNR family transcriptional regulator  28.89 
 
 
258 aa  73.2  0.000000000003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  29.26 
 
 
229 aa  73.2  0.000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  32.02 
 
 
246 aa  72.8  0.000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  31.09 
 
 
253 aa  73.2  0.000000000003  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  30.37 
 
 
236 aa  71.6  0.000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  30.3 
 
 
237 aa  70.1  0.00000000002  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  29.9 
 
 
234 aa  69.7  0.00000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  29.38 
 
 
227 aa  67.4  0.0000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  28.73 
 
 
222 aa  67.4  0.0000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  27.84 
 
 
221 aa  67  0.0000000002  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  28.19 
 
 
229 aa  66.6  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  28.65 
 
 
227 aa  67  0.0000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  28 
 
 
227 aa  67  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  27.41 
 
 
232 aa  66.6  0.0000000003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  27.17 
 
 
229 aa  65.9  0.0000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009441  Fjoh_1583  CRP/FNR family transcriptional regulator  24.46 
 
 
198 aa  66.2  0.0000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  27.94 
 
 
236 aa  65.9  0.0000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  28.79 
 
 
230 aa  66.2  0.0000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  29.35 
 
 
243 aa  65.9  0.0000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  31.49 
 
 
227 aa  65.9  0.0000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  30 
 
 
227 aa  65.9  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  27.36 
 
 
228 aa  65.9  0.0000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  28.33 
 
 
352 aa  65.5  0.0000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  26.94 
 
 
225 aa  65.1  0.0000000006  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  26.92 
 
 
225 aa  65.5  0.0000000006  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  29.38 
 
 
225 aa  64.7  0.0000000008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  27.27 
 
 
246 aa  64.7  0.0000000008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  27.22 
 
 
250 aa  64.7  0.0000000009  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.49 
 
 
225 aa  64.7  0.000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  31.63 
 
 
231 aa  63.5  0.000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  27.78 
 
 
227 aa  63.5  0.000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  27.89 
 
 
227 aa  63.5  0.000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  30.21 
 
 
222 aa  63.2  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  30.54 
 
 
241 aa  62.8  0.000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  27.89 
 
 
227 aa  63.2  0.000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  24.31 
 
 
228 aa  62.4  0.000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  24.75 
 
 
224 aa  62  0.000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  29.19 
 
 
241 aa  62  0.000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  28.09 
 
 
233 aa  61.2  0.000000009  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  26.18 
 
 
229 aa  60.8  0.00000001  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  28.81 
 
 
230 aa  60.8  0.00000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  28.09 
 
 
232 aa  60.8  0.00000001  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  28.87 
 
 
254 aa  61.2  0.00000001  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  23.76 
 
 
229 aa  60.8  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  28.81 
 
 
230 aa  60.8  0.00000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  25 
 
 
228 aa  60.8  0.00000001  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  28.81 
 
 
230 aa  60.8  0.00000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  28.81 
 
 
230 aa  60.8  0.00000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.52 
 
 
219 aa  61.2  0.00000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  27.27 
 
 
234 aa  61.2  0.00000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  28.8 
 
 
232 aa  61.2  0.00000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  26.88 
 
 
249 aa  60.1  0.00000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  28.81 
 
 
229 aa  60.5  0.00000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  27.27 
 
 
226 aa  60.1  0.00000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  28.81 
 
 
229 aa  60.5  0.00000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  28.81 
 
 
229 aa  60.5  0.00000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  30.25 
 
 
229 aa  60.5  0.00000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  25.87 
 
 
226 aa  60.5  0.00000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  21.88 
 
 
251 aa  59.7  0.00000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  28.98 
 
 
225 aa  59.7  0.00000003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  25.82 
 
 
232 aa  59.7  0.00000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0691  transcriptional regulator, Crp/Fnr family  26.49 
 
 
214 aa  59.7  0.00000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.275069  normal 
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  24.58 
 
 
221 aa  59.7  0.00000003  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_008530  LGAS_0984  Crp-like transcriptional regulator  27.72 
 
 
209 aa  60.1  0.00000003  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  24.6 
 
 
225 aa  59.3  0.00000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  27.22 
 
 
234 aa  58.9  0.00000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_007643  Rru_A1622  Crp/FNR family transcriptional regulator  26.7 
 
 
259 aa  58.9  0.00000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.366469  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  27.17 
 
 
241 aa  58.5  0.00000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  26.09 
 
 
201 aa  58.5  0.00000007  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  24.75 
 
 
224 aa  58.2  0.00000008  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  28.24 
 
 
225 aa  58.2  0.00000008  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  29.31 
 
 
255 aa  58.2  0.00000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  22.16 
 
 
239 aa  58.2  0.00000009  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  24 
 
 
218 aa  57.8  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  25.97 
 
 
222 aa  57.8  0.0000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  25.49 
 
 
234 aa  57.8  0.0000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  21.9 
 
 
232 aa  57.8  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  25.26 
 
 
239 aa  57.4  0.0000001  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  26.26 
 
 
226 aa  57  0.0000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  28.07 
 
 
225 aa  57  0.0000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  26.11 
 
 
223 aa  57.4  0.0000002  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  28.07 
 
 
225 aa  57  0.0000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  25.13 
 
 
226 aa  56.6  0.0000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  25.41 
 
 
240 aa  57.4  0.0000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  28.49 
 
 
227 aa  57  0.0000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
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