Gene Pecwa_2778 details

Gene Information

• Locus tag: Pecwa_2778
• ID: 8531182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3042042
• End bp: 3042758
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 52%
• Product: transcriptional regulator, Crp/Fnr family
• Protein accession: YP_003260138
• Protein GI: 261822032

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0529131
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTTG TCAAAAAGGC GCTATCGCCC GATGAATACG GCGACGTGCT GTTTCAGCAT 
GACTGGATGC GCGGTGAATC CAGCGACGTA GTGTGCGAGC TACTGGCCAA AAGCGAGCGC 
CTGTTTTTCC AGCAGGATGA TGTTCTGTTT CGCGAAGGTG ACAAAATGCA GCACTGTTTG 
CTAGTTGAAA CGGGAAAATT ACAGGCTTTT CGCCATACCT ATGGCGGAGA TGAGAAAATT 
TTCGGGCAGT TTGAACGCGG TGAATTTGTC GCTATTGCTG CCGTCTTTAT GGATCACGGC 
CGCTTCCCGA TGAACATCCG CGCGCTGAGC GACGGCCACA CGCTGATGAT CCCACGGCAG 
GATATTCACC AGTTTTGTTT GCAACGTCCC GAACTGGCGC TGCGTTTGCT GAATTATCTA 
GGCAAAAAGC TCTACTCGAC GATCAACCAA ATCGACTGGC TGACCTCCAG CTCCGCACCA 
CAGCGTCTGG CAGATTATCT GCTGCGGCAG CATCACATTC AGCAAACTCA ACACCTGACA 
TTGCCAGTGA GCCGGGGTCA GCTCGCCACA TCATTGGGGA TGCGCAGTGA AACATTGAGT 
CGATTGATGT CTGACTGGAA GCGGCAAGGC CACATTACCT ATCGAGGCCA TCAGGTGGAA 
TTGTGCGATC TGATTTATCT GAAAGCGTTG GCAGCCGAAG CCAGACGAAC ATTCTGA 

 

Protein sequence

MTFVKKALSP DEYGDVLFQH DWMRGESSDV VCELLAKSER LFFQQDDVLF REGDKMQHCL 
LVETGKLQAF RHTYGGDEKI FGQFERGEFV AIAAVFMDHG RFPMNIRALS DGHTLMIPRQ 
DIHQFCLQRP ELALRLLNYL GKKLYSTINQ IDWLTSSSAP QRLADYLLRQ HHIQQTQHLT 
LPVSRGQLAT SLGMRSETLS RLMSDWKRQG HITYRGHQVE LCDLIYLKAL AAEARRTF