More than 300 homologs were found in PanDaTox collection
for query gene AFE_1658 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  100 
 
 
222 aa  447  1e-125  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  100 
 
 
222 aa  447  1e-125  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  56.94 
 
 
246 aa  239  2e-62  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  56.94 
 
 
229 aa  238  4e-62  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  39.91 
 
 
225 aa  155  7e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  36.57 
 
 
243 aa  137  1e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  34.58 
 
 
227 aa  136  3.0000000000000003e-31  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  36.11 
 
 
231 aa  132  5e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  36.41 
 
 
234 aa  125  6e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  37.61 
 
 
253 aa  123  2e-27  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  35.41 
 
 
232 aa  122  4e-27  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  40.8 
 
 
231 aa  121  9e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  37.21 
 
 
245 aa  120  9.999999999999999e-27  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  32.11 
 
 
232 aa  119  4.9999999999999996e-26  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  32.86 
 
 
236 aa  118  7.999999999999999e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  35.68 
 
 
229 aa  115  3.9999999999999997e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  35.68 
 
 
229 aa  115  3.9999999999999997e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  35.68 
 
 
229 aa  115  3.9999999999999997e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  35.68 
 
 
230 aa  115  3.9999999999999997e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  35.68 
 
 
230 aa  115  3.9999999999999997e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  35.68 
 
 
229 aa  115  3.9999999999999997e-25  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  35.68 
 
 
230 aa  115  3.9999999999999997e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  35.68 
 
 
230 aa  115  3.9999999999999997e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  36.23 
 
 
237 aa  115  6.9999999999999995e-25  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  33.18 
 
 
229 aa  115  6.9999999999999995e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  37 
 
 
254 aa  114  1.0000000000000001e-24  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  31.84 
 
 
229 aa  114  2.0000000000000002e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  32.87 
 
 
233 aa  112  4.0000000000000004e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  29.22 
 
 
255 aa  110  1.0000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  31.43 
 
 
229 aa  109  3e-23  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_003296  RS02297  transcription regulator protein  32.87 
 
 
225 aa  109  4.0000000000000004e-23  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  32.13 
 
 
230 aa  109  4.0000000000000004e-23  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  32.55 
 
 
238 aa  108  6e-23  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  34.78 
 
 
224 aa  108  8.000000000000001e-23  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  34.74 
 
 
228 aa  108  8.000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  37.38 
 
 
222 aa  108  9.000000000000001e-23  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  31.92 
 
 
225 aa  106  3e-22  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  31.92 
 
 
225 aa  106  3e-22  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2636  Crp/FNR family transcriptional regulator  33.95 
 
 
234 aa  106  3e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  28.77 
 
 
241 aa  106  3e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  27.85 
 
 
241 aa  105  4e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  31.1 
 
 
239 aa  106  4e-22  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  32.95 
 
 
228 aa  105  5e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  31.02 
 
 
249 aa  105  6e-22  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  31.3 
 
 
252 aa  105  7e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  33.66 
 
 
248 aa  105  7e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  32.88 
 
 
236 aa  104  1e-21  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3466  regulator of Biofilm formation Fnr Family  34.17 
 
 
235 aa  104  1e-21  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  31.05 
 
 
241 aa  103  2e-21  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  30.52 
 
 
225 aa  103  2e-21  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  30.37 
 
 
226 aa  102  6e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  30.52 
 
 
225 aa  102  6e-21  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  32.58 
 
 
254 aa  101  8e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  33.49 
 
 
227 aa  101  8e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  30.32 
 
 
227 aa  100  1e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  28.64 
 
 
250 aa  101  1e-20  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  29.41 
 
 
243 aa  100  1e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  33.49 
 
 
227 aa  101  1e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  31.34 
 
 
241 aa  100  2e-20  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  31.09 
 
 
272 aa  100  2e-20  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  29.68 
 
 
227 aa  99.4  4e-20  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  31.34 
 
 
249 aa  99.4  4e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  26.9 
 
 
227 aa  97.8  1e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  32.27 
 
 
227 aa  97.8  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  28.9 
 
 
229 aa  97.1  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  31.22 
 
 
223 aa  96.3  4e-19  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  29.24 
 
 
254 aa  95.1  8e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_010505  Mrad2831_2595  Crp/FNR family transcriptional regulator  32.22 
 
 
251 aa  95.1  8e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.396823  normal 
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  29.24 
 
 
254 aa  95.1  8e-19  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  30.45 
 
 
227 aa  94.7  9e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3331  Crp/FNR family transcriptional regulator  29.53 
 
 
258 aa  94  1e-18  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2638  transcriptional regulator, Crp/Fnr family  31.58 
 
 
222 aa  94  2e-18  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  32.28 
 
 
229 aa  94  2e-18  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  29.63 
 
 
227 aa  92.8  4e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  28.64 
 
 
225 aa  91.3  1e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  34.76 
 
 
221 aa  87.4  1e-16  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  27.27 
 
 
231 aa  86.7  2e-16  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  27.27 
 
 
231 aa  86.7  2e-16  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  27.8 
 
 
231 aa  86.3  3e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3735  transcriptional regulator, Crp/Fnr family  31.15 
 
 
210 aa  85.9  5e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.77 
 
 
225 aa  85.1  8e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  32.09 
 
 
222 aa  85.1  9e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  34.05 
 
 
246 aa  84.3  0.000000000000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  27.75 
 
 
231 aa  83.6  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  28.5 
 
 
219 aa  84  0.000000000000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_007413  Ava_3340  Crp/FNR family transcriptional regulator  36.11 
 
 
207 aa  84  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0648445 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  28.51 
 
 
226 aa  83.6  0.000000000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  28.11 
 
 
224 aa  82.8  0.000000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  23.96 
 
 
236 aa  82  0.000000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3585  Crp/FNR family transcriptional regulator  29.47 
 
 
215 aa  82  0.000000000000007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.921585 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.19 
 
 
225 aa  81.6  0.000000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2376  CRP/FNR family transcriptional regulator  28.34 
 
 
226 aa  80.9  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.253524 
 
 
-
 
NC_012850  Rleg_3301  transcriptional regulator, Crp/Fnr family  34.05 
 
 
227 aa  81.3  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306356 
 
 
-
 
NC_011894  Mnod_2132  transcriptional regulator, Crp/Fnr family  32.39 
 
 
293 aa  80.1  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.263338  n/a   
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  32.04 
 
 
257 aa  80.9  0.00000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  32.63 
 
 
225 aa  80.1  0.00000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0352  CRP/FNR family transcriptional regulator  28.96 
 
 
229 aa  80.1  0.00000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0436  transcription regulator  27.59 
 
 
214 aa  79.7  0.00000000000003  Campylobacter curvus 525.92  Bacteria  normal  0.0316636  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  32.63 
 
 
225 aa  80.1  0.00000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  27.5 
 
 
250 aa  79.7  0.00000000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
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