More than 300 homologs were found in PanDaTox collection
for query gene Dtpsy_2689 on replicon NC_011992
Organism: Acidovorax ebreus TPSY



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  100 
 
 
246 aa  498  1e-140  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  98.19 
 
 
221 aa  440  1e-123  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  38.33 
 
 
238 aa  160  2e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  42.71 
 
 
238 aa  154  1e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  42.72 
 
 
254 aa  149  4e-35  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  35.29 
 
 
229 aa  120  1.9999999999999998e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  35.96 
 
 
246 aa  120  1.9999999999999998e-26  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  35.96 
 
 
229 aa  120  3e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  33.78 
 
 
230 aa  117  9.999999999999999e-26  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  33.18 
 
 
225 aa  116  3e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  33.93 
 
 
229 aa  115  6e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  34.43 
 
 
228 aa  114  1.0000000000000001e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  31.72 
 
 
229 aa  113  2.0000000000000002e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  33.64 
 
 
231 aa  111  1.0000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  33.65 
 
 
232 aa  111  1.0000000000000001e-23  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  35.45 
 
 
222 aa  110  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  33.05 
 
 
248 aa  110  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  33.19 
 
 
241 aa  110  3e-23  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  31.25 
 
 
236 aa  109  4.0000000000000004e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  36.06 
 
 
238 aa  109  4.0000000000000004e-23  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  32.14 
 
 
226 aa  109  5e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  30.65 
 
 
239 aa  107  2e-22  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  31.28 
 
 
227 aa  106  4e-22  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  30.84 
 
 
227 aa  105  5e-22  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  34.05 
 
 
222 aa  100  2e-20  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  34.05 
 
 
222 aa  100  2e-20  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  31.75 
 
 
229 aa  99.4  5e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  32.35 
 
 
261 aa  99  6e-20  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  30.91 
 
 
227 aa  98.2  9e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  32.02 
 
 
232 aa  97.1  2e-19  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  31.53 
 
 
228 aa  94  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  33.04 
 
 
237 aa  93.2  3e-18  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  33.64 
 
 
254 aa  92.4  5e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30.49 
 
 
224 aa  92.4  6e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  25.31 
 
 
243 aa  92  8e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  29.05 
 
 
224 aa  89.7  3e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  28.64 
 
 
234 aa  90.1  3e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_009092  Shew_3331  Crp/FNR family transcriptional regulator  31.21 
 
 
258 aa  89.7  4e-17  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  33.33 
 
 
223 aa  89.7  4e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  31.28 
 
 
227 aa  89  6e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  31.66 
 
 
224 aa  88.2  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  29.19 
 
 
225 aa  87.8  1e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.37 
 
 
228 aa  87  2e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  29.89 
 
 
249 aa  86.7  3e-16  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_003296  RS02297  transcription regulator protein  31.14 
 
 
225 aa  87  3e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  28.42 
 
 
236 aa  86.7  3e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  24.74 
 
 
234 aa  86.7  3e-16  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  27.97 
 
 
235 aa  86.7  3e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  29.91 
 
 
241 aa  86.7  3e-16  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  23.61 
 
 
232 aa  86.3  4e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  32.8 
 
 
243 aa  86.3  4e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  26 
 
 
230 aa  85.1  8e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  26 
 
 
230 aa  85.1  8e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  26 
 
 
229 aa  85.1  8e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  26 
 
 
230 aa  85.1  8e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  26 
 
 
230 aa  85.1  8e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  26 
 
 
229 aa  85.1  8e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  26 
 
 
229 aa  85.1  8e-16  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  26 
 
 
229 aa  85.1  9e-16  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  29.46 
 
 
236 aa  83.6  0.000000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  25.91 
 
 
250 aa  84  0.000000000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  29.13 
 
 
236 aa  83.6  0.000000000000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  27.03 
 
 
227 aa  84.3  0.000000000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  27.32 
 
 
272 aa  84.3  0.000000000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  25.25 
 
 
232 aa  83.2  0.000000000000003  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  28.27 
 
 
234 aa  83.2  0.000000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  28.7 
 
 
249 aa  83.2  0.000000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  32.98 
 
 
225 aa  83.6  0.000000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  30.37 
 
 
225 aa  83.6  0.000000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  31.09 
 
 
228 aa  82.8  0.000000000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  29.91 
 
 
227 aa  82.8  0.000000000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.64 
 
 
227 aa  83.2  0.000000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  29.63 
 
 
225 aa  82.8  0.000000000000005  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  30.57 
 
 
239 aa  82.4  0.000000000000007  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0528  transcriptional regulator, Crp/Fnr family  31.31 
 
 
244 aa  82.4  0.000000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.32 
 
 
226 aa  82  0.000000000000007  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  24.44 
 
 
225 aa  81.3  0.00000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0691  cyclic nucleotide-binding protein  26.9 
 
 
212 aa  81.3  0.00000000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  27.48 
 
 
257 aa  80.9  0.00000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_008699  Noca_1619  cyclic nucleotide-binding  30.05 
 
 
235 aa  81.3  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  0.146026  n/a   
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  25.79 
 
 
231 aa  80.1  0.00000000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  27.56 
 
 
236 aa  80.1  0.00000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1939  transcriptional regulator, Crp/Fnr family  29.15 
 
 
235 aa  80.1  0.00000000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  23.92 
 
 
219 aa  80.1  0.00000000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  30.35 
 
 
229 aa  80.5  0.00000000000003  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  28.1 
 
 
229 aa  80.1  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  28.16 
 
 
226 aa  80.1  0.00000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  29.47 
 
 
222 aa  79.7  0.00000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  28.8 
 
 
225 aa  79.7  0.00000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  25.66 
 
 
231 aa  79.7  0.00000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_008262  CPR_1062  Crp/FNR family transcriptional regulator  22.83 
 
 
236 aa  79.3  0.00000000000005  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.8 
 
 
225 aa  79.3  0.00000000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  30.37 
 
 
220 aa  78.6  0.00000000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  23.86 
 
 
232 aa  78.6  0.00000000000008  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  22.37 
 
 
236 aa  78.6  0.00000000000009  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_008025  Dgeo_0780  Crp/FNR family transcriptional regulator  34.09 
 
 
231 aa  77.8  0.0000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.390237  normal 
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  24.26 
 
 
232 aa  77  0.0000000000002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  28.89 
 
 
236 aa  77  0.0000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  22.38 
 
 
225 aa  77.4  0.0000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  29.95 
 
 
225 aa  77.4  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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