Gene CPF_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1250 
Symbol 
ID4203248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1423346 
End bp1424056 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content28% 
IMG OID638082131 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_695696 
Protein GI110801364 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.403908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GTGATTGCAA GGGCTATAAA AGTTGTTTAT GCAACAAGGA GCTTACTATA 
TTTAAGGATT TAACAGAGGA AGAATTTAAT AAATTAGCTA CTGGAATGAC ATGTTTTCAT
TTTAATAAAG GGGAATATAT ATGTTATGAA GGTGAAAAGC TTTCGAAGCT ATTTATAATA
AGTAAGGGAA GTGTAAAGAC ATCAAAGTTG ACAAAAGGAG GAAAAGAGCA AATAATGCAC
ATATTCTCTA TAGGGGACTA TTTTGGAGAG ACAAGCCTCT TTAATAATGA GGGAGGAATT
TTATTTAATG CTATTGCTTT AAATGATGTT ATAGTTTGTG CTGTAGATAA GGATAAAGTT
GATAGTGTCT TAGAAGAAAA TCCAAGAATA GCTATAGTTG TTTTGAAATC CTTAACTAAT
CGTTTAAAGG ATACTGAAGA ATTTGCTCAT AAATTAGTAA CTAATGATGT TAGAGTTAGA
ATAGCATATA TGTTAAAAGA GTTTAAGAGA AAATATGGCA AAATAGAAAA TGGGGAAATA
TTTATTGATT TACCAATTAA TAGAGAAGAT ATGGCTAATT ATTGTGGTAT AACTAGAGAA
ACAATGAGTA GAAAACTCTC TATATTTGAG CACGAAGGAT TAATAGAAAT TAGAGGAAAT
AAATCTCTAA TAATAAAAGA CATAGAAAGA TTAAATAAAA TAATTTCATA G
 
Protein sequence
MKKCDCKGYK SCLCNKELTI FKDLTEEEFN KLATGMTCFH FNKGEYICYE GEKLSKLFII 
SKGSVKTSKL TKGGKEQIMH IFSIGDYFGE TSLFNNEGGI LFNAIALNDV IVCAVDKDKV
DSVLEENPRI AIVVLKSLTN RLKDTEEFAH KLVTNDVRVR IAYMLKEFKR KYGKIENGEI
FIDLPINRED MANYCGITRE TMSRKLSIFE HEGLIEIRGN KSLIIKDIER LNKIIS