Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1250 |
Symbol | |
ID | 4203248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1423346 |
End bp | 1424056 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082131 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_695696 |
Protein GI | 110801364 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.403908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT GTGATTGCAA GGGCTATAAA AGTTGTTTAT GCAACAAGGA GCTTACTATA TTTAAGGATT TAACAGAGGA AGAATTTAAT AAATTAGCTA CTGGAATGAC ATGTTTTCAT TTTAATAAAG GGGAATATAT ATGTTATGAA GGTGAAAAGC TTTCGAAGCT ATTTATAATA AGTAAGGGAA GTGTAAAGAC ATCAAAGTTG ACAAAAGGAG GAAAAGAGCA AATAATGCAC ATATTCTCTA TAGGGGACTA TTTTGGAGAG ACAAGCCTCT TTAATAATGA GGGAGGAATT TTATTTAATG CTATTGCTTT AAATGATGTT ATAGTTTGTG CTGTAGATAA GGATAAAGTT GATAGTGTCT TAGAAGAAAA TCCAAGAATA GCTATAGTTG TTTTGAAATC CTTAACTAAT CGTTTAAAGG ATACTGAAGA ATTTGCTCAT AAATTAGTAA CTAATGATGT TAGAGTTAGA ATAGCATATA TGTTAAAAGA GTTTAAGAGA AAATATGGCA AAATAGAAAA TGGGGAAATA TTTATTGATT TACCAATTAA TAGAGAAGAT ATGGCTAATT ATTGTGGTAT AACTAGAGAA ACAATGAGTA GAAAACTCTC TATATTTGAG CACGAAGGAT TAATAGAAAT TAGAGGAAAT AAATCTCTAA TAATAAAAGA CATAGAAAGA TTAAATAAAA TAATTTCATA G
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Protein sequence | MKKCDCKGYK SCLCNKELTI FKDLTEEEFN KLATGMTCFH FNKGEYICYE GEKLSKLFII SKGSVKTSKL TKGGKEQIMH IFSIGDYFGE TSLFNNEGGI LFNAIALNDV IVCAVDKDKV DSVLEENPRI AIVVLKSLTN RLKDTEEFAH KLVTNDVRVR IAYMLKEFKR KYGKIENGEI FIDLPINRED MANYCGITRE TMSRKLSIFE HEGLIEIRGN KSLIIKDIER LNKIIS
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