Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1444 |
Symbol | |
ID | 4021921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1613454 |
End bp | 1614164 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961636 |
Product | Crp/Fnr family transcriptional regulator |
Protein accession | YP_568582 |
Protein GI | 91975923 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.920255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCA TCGACGCATC CCTCGTGACG AAGCTGCCGC TGTTTGCGGG GCTGACTGCG GACGAGCTCG ACGCCATTCT GCAGCAGGCG CGCTCGATCA GGGTTCCGAA GAACGCCAAT GTGTTCGAGC AAGGCGAGGA CGCGCATTCC TTCTTCGTGT TGCTGCACGG CCATGTCCGC GCCAGCAAAC TGACGCCGGC CGGCGAGCAG GTGGTGGTGC GCTACGTCTC GCCCGGCGAG ACGCTGGGCG TGGCGATGGC GATCGGACTA CTCAACTATC CAGCGACGGC GACCGCGGTC GACGACAGCA TCGTGCTGGC ATGGCCGACG GCGGCCTGGC CGCGCCTCGT CGAGCAATAT CCGTCGCTCG CCACCAATAC GCTGCGCACC GTGGGCGCGC GGCTGCAGGA AACCCATTCG CGCGTCGTCG AAATCTCCAC CCAGCAGGTC GAGCAGCGCG TCGCGCACGC CCTGCTGCGG CTCGCCAAGC AATCCGGCCG CAAGGTCGCA AACGGCGTCG AAATCGATTT CCCGATCAGC CGCCAGGACA TCGCGCAGAT GACCGGAACC ACGCTGCACA CCGTCAGCCG GCTGCTCTCC GGCTGGGAGC AGAAGGGGCT GATCGAGAGC GGCCGCCAGC GCATCGTGCT CCGCAATCTG GATCAGCTCG TGGTGCTGGC GGACCAAACG CCCGACGACC AGACGTCATG A
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Protein sequence | MATIDASLVT KLPLFAGLTA DELDAILQQA RSIRVPKNAN VFEQGEDAHS FFVLLHGHVR ASKLTPAGEQ VVVRYVSPGE TLGVAMAIGL LNYPATATAV DDSIVLAWPT AAWPRLVEQY PSLATNTLRT VGARLQETHS RVVEISTQQV EQRVAHALLR LAKQSGRKVA NGVEIDFPIS RQDIAQMTGT TLHTVSRLLS GWEQKGLIES GRQRIVLRNL DQLVVLADQT PDDQTS
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