Gene RPD_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1444 
Symbol 
ID4021921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1613454 
End bp1614164 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID637961636 
ProductCrp/Fnr family transcriptional regulator 
Protein accessionYP_568582 
Protein GI91975923 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.920255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TCGACGCATC CCTCGTGACG AAGCTGCCGC TGTTTGCGGG GCTGACTGCG 
GACGAGCTCG ACGCCATTCT GCAGCAGGCG CGCTCGATCA GGGTTCCGAA GAACGCCAAT
GTGTTCGAGC AAGGCGAGGA CGCGCATTCC TTCTTCGTGT TGCTGCACGG CCATGTCCGC
GCCAGCAAAC TGACGCCGGC CGGCGAGCAG GTGGTGGTGC GCTACGTCTC GCCCGGCGAG
ACGCTGGGCG TGGCGATGGC GATCGGACTA CTCAACTATC CAGCGACGGC GACCGCGGTC
GACGACAGCA TCGTGCTGGC ATGGCCGACG GCGGCCTGGC CGCGCCTCGT CGAGCAATAT
CCGTCGCTCG CCACCAATAC GCTGCGCACC GTGGGCGCGC GGCTGCAGGA AACCCATTCG
CGCGTCGTCG AAATCTCCAC CCAGCAGGTC GAGCAGCGCG TCGCGCACGC CCTGCTGCGG
CTCGCCAAGC AATCCGGCCG CAAGGTCGCA AACGGCGTCG AAATCGATTT CCCGATCAGC
CGCCAGGACA TCGCGCAGAT GACCGGAACC ACGCTGCACA CCGTCAGCCG GCTGCTCTCC
GGCTGGGAGC AGAAGGGGCT GATCGAGAGC GGCCGCCAGC GCATCGTGCT CCGCAATCTG
GATCAGCTCG TGGTGCTGGC GGACCAAACG CCCGACGACC AGACGTCATG A
 
Protein sequence
MATIDASLVT KLPLFAGLTA DELDAILQQA RSIRVPKNAN VFEQGEDAHS FFVLLHGHVR 
ASKLTPAGEQ VVVRYVSPGE TLGVAMAIGL LNYPATATAV DDSIVLAWPT AAWPRLVEQY
PSLATNTLRT VGARLQETHS RVVEISTQQV EQRVAHALLR LAKQSGRKVA NGVEIDFPIS
RQDIAQMTGT TLHTVSRLLS GWEQKGLIES GRQRIVLRNL DQLVVLADQT PDDQTS