Gene Lferr_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1356 
Symbol 
ID6877330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1310566 
End bp1311234 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content50% 
IMG OID642789229 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002219796 
Protein GI198283475 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGAT TGCGCCGAAC AGAAATATTC TCTGTCTGGT CGGATGAGGA CCTTTCGCAT 
TTGTTTAAGG GCGCACGTGT TCTGGAGATG AGTGTCGGGC AAATCCTTTT CCTCGAAGGC
GATGCAGCTA CCGCTTTCTA TTTTCTTCTG GATGGACAAG TGAAGCTGGT GACGTCGGCT
GCTGACGGCC ACGAGAAAAT AGTTGATATT TTGCAAGGCG GAGACCTTTT TGCAGAAGCT
GTAGCCTTTT TGGGATATCG TTATCCTGTG CAGGCAATAG CGGCCATGCC GAGCCGGGTT
CTGGAAATTC CCCTTACGAT ATTTCTCGTC ACCCTACAGC AGCATCAGGA GCTGATGCTG
CAAATGTTGG GCAGACTGAG TCTGCGTTTA CGTCATTTAA TAATGGAGTT GCGACATCTT
ACTGTGGAAT CCGCTGACCA ACGGGTTGTA GGATATCTGC TGGAACTTTG CCCATCGGGA
AATTCTCCCG TGAGTTTGCT TCTACCTGCC AAAAAGGCCA TGATCGCGGC GCGACTAGGT
TTAACCCCGG AAACATTTTC TCGTGTGTTG AAGCGATTGC GAGAGGAGCA TTTGATCACG
GTTGAAAAAC TCAAGATATA CATTCACCGC CCTTCTGCGT TACGGCAATG GGCGAAGGAA
GACCGCTGA
 
Protein sequence
MERLRRTEIF SVWSDEDLSH LFKGARVLEM SVGQILFLEG DAATAFYFLL DGQVKLVTSA 
ADGHEKIVDI LQGGDLFAEA VAFLGYRYPV QAIAAMPSRV LEIPLTIFLV TLQQHQELML
QMLGRLSLRL RHLIMELRHL TVESADQRVV GYLLELCPSG NSPVSLLLPA KKAMIAARLG
LTPETFSRVL KRLREEHLIT VEKLKIYIHR PSALRQWAKE DR