Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0857 |
Symbol | |
ID | 7136000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 781692 |
End bp | 782381 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643529263 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002425342 |
Protein GI | 218665508 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATA GCAAGGAGGC GCTGCTGCTT CGCCTGCACC ACACCCCGCT TTTTTCCGCA TGGCCCAACG ATATGATCGC GCCGCTGCTC GCCCAATCCC AGCCCCTGAC TCTGGAGTCG GGAGAGATTC TCTTTGCCGA GGGATCGCCA GCCCGATCCT TCTATTTCCT GGCGGTAGGA CGAATTAATC TGATTGCGGC AGCGGCCACG GGGCAGGAGA AAATTGTCGA AATCATCCAG CCCGATGATC TTTTCGCCGA GGCGGTGGCC TTTCTCGGGG GGCGCTATCC GGTGACGGCG CAGGCCGATG CCACGACCAC GGTACTGGAG ATCCCGCTGG ACCTTTTTGT CGCGACTCTG GAGCAGCGGC CATTGTTGAT GCGCCAGATG CTGGCGCGCC TCAGTATGCG CCTGCATTTT CTGGTCAAGG AGCTGCGCCA TCTGAGTGTG GAGTCGGCGG AGCAGCGCTT GGCCAGCTAT CTGCTGGAGT TGTGTCCGGT AGTCAATAGC CCCGCTGCCA TTGAGCTCCC CGCCAAGAAA GCGGCGGTCG CGGCGCGTTT GGGCTTGACG CCGGAAACGC TGTCGCGGGT GTTGTCCAGA ATGCGTAAGG CAGGACTCAT AGAAGTGGAA CAACGGACGA TCAGCATTCC CGACCCTCTT GCCTTACGGC GCTGGGCCGG CGGGCGCTGA
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Protein sequence | MGNSKEALLL RLHHTPLFSA WPNDMIAPLL AQSQPLTLES GEILFAEGSP ARSFYFLAVG RINLIAAAAT GQEKIVEIIQ PDDLFAEAVA FLGGRYPVTA QADATTTVLE IPLDLFVATL EQRPLLMRQM LARLSMRLHF LVKELRHLSV ESAEQRLASY LLELCPVVNS PAAIELPAKK AAVAARLGLT PETLSRVLSR MRKAGLIEVE QRTISIPDPL ALRRWAGGR
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