Gene Mmc1_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0460 
Symbol 
ID4483963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp550716 
End bp551414 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID639721207 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_864391 
Protein GI117923774 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.884408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC ACCCGCTCAA AGATGCAGAT CTGGATCAGA CCCGCAAGAG CCATCTGTTT 
ACACCCTTAT CGGAGCCTGC TTGGCTTCCC TTAGCGGCGC AGTTGAGCCG TCGCACCTTG
GCGAGCGGAG AGATTTTATT TCAACAGGGG GATCCCTTTG AGGCTTTTTT TCTGGTGTTG
CGGGGCGGCA TCAAGCTCTA TCGTCTCTCT GCCGATGGTG CTGAAAAGGT CATTGAAGTG
ATTATGCCCG GACAAACCTT TGGTGAAGCG GTCATGTTTG CCCAAGGCAA CCGCTATCCG
GTTACGGCGG AGGCGTTGGA AGCCACGGTG TTGGTGGCGG TTCCCTCCTC GGCCTACATG
GCTATGTTGC AACGCTATCC TGAAGCCAGC GTGGGACTGC TCAAAGATAT GAGCCAGCGC
CTGCACCATT TGGTGATGGA GGTGGATCGC GTCACCTTGC AGCGCGCCCG TGAGCGTCTG
CTCTCCTATT TAGGGCAACA GGTTGCCTGT GGCAATGGTA GCAGTTGTAC CCTAAAGATG
CCCCGCAAGG TGTTGGCTTC GCGCTTATCC ATGCAACCAG AAACCCTCTC TCGGCTGTTT
CGTGGGCTTA AAGATCAAGG CATTATTGCC GAACAGGGCC AGATTATCAC CGTGCTCGAC
CCCCATGCCG TACAAGAGGG CTATCTGGAT GAGCTCTAA
 
Protein sequence
MNHHPLKDAD LDQTRKSHLF TPLSEPAWLP LAAQLSRRTL ASGEILFQQG DPFEAFFLVL 
RGGIKLYRLS ADGAEKVIEV IMPGQTFGEA VMFAQGNRYP VTAEALEATV LVAVPSSAYM
AMLQRYPEAS VGLLKDMSQR LHHLVMEVDR VTLQRARERL LSYLGQQVAC GNGSSCTLKM
PRKVLASRLS MQPETLSRLF RGLKDQGIIA EQGQIITVLD PHAVQEGYLD EL