Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4620 |
Symbol | |
ID | 5707682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5243179 |
End bp | 5243892 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641274022 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_001539369 |
Protein GI | 159040116 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.128051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTGA GTCGTGGGGA TGGGATCCGG TCGATGCTGC GGGATGTGGC ATTGTTCAGT GAGTTGCCGG AGAGTCTTTT GGCGGCGGTG GCCGTGGATG CTCGGGAGCG ACGGCTGTTG CGGGGCGAGG TGTTGTTCCG GGCGGGTGAG CTGTGTTCGG CGTTCTACTG TGTTCTGTCC GGCCAGGTCA AGTTGACTGT GGCCGGTGGG GGTGGTGGGG AAAAGGTTCT GGAGATCGTC GCGCCTGGTG AGACGTTCGC GGAGGCACTG ATGTTCGGGC ATCGGCCGTA CCCGGTGACA GCCGTGGCGT TGTCCGCGAC ACGTCTACTG GTGGTCGGAT CCCGCACCGT CCATGATCTG ATCGCGCAGG ATCCGGACTT CGCCCGGCTG ATGCTGGTGG GTATGTCGGT GCGGTTACAC AGGCTGGTCA GGCAGATCGC GTCGGTGTCG TTGAGCAGTG CCGCTGAGCG GGTGGCTGAC CTGTTGCTGT CGCTGGCTGG TCCGGAGGCG GGTGAGTCGG TGGTGGTGGA GCTGCCGGCG GGTAAGGCGG TGCTGGCGTC GCGGCTGAAT CTGTCGCCGG AGCATTTCTC CCGGACGTTG CGGGATCTTG CCGATACGGG CTTGATCCGG GTCGAGGGGC GTCGGGTGGC CGTGCTCGAC GTAGCCCGGA TGCGCCTGGT TGTCGAGGGT GGCCGACTGG GTCCGGTTCC TTGA
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Protein sequence | MAVSRGDGIR SMLRDVALFS ELPESLLAAV AVDARERRLL RGEVLFRAGE LCSAFYCVLS GQVKLTVAGG GGGEKVLEIV APGETFAEAL MFGHRPYPVT AVALSATRLL VVGSRTVHDL IAQDPDFARL MLVGMSVRLH RLVRQIASVS LSSAAERVAD LLLSLAGPEA GESVVVELPA GKAVLASRLN LSPEHFSRTL RDLADTGLIR VEGRRVAVLD VARMRLVVEG GRLGPVP
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