Gene Cagg_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1798 
Symbol 
ID7267710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2204961 
End bp2205635 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content56% 
IMG OID643566638 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002463133 
Protein GI219848700 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.112724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.701218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAACG AACGAGTAGC CCAATTGCGC CGAGTGAGCT TCTGCACTCA CCTGCCCGAT 
CATGTCGTGC AGGCGTTAGC GATGATTGCC CAACCGCGCT CGTATCAGTC GGGTGCTGTG
ATTGTGCTAG CCGGCGAACC ACCGCAGGCG ATGTACACGA TTGTTGCCGG ACGGGTAAAG
TTGGTGCGCA TTGCCCTCAA TGGCCGCGAG CAGATCGTCA ATGTCATGGG GGCCGGTCAG
CATTTCAATA CCGTGCCAAT ATTTGACCAC GGCCCATGTC CGGTCAATGT TCAAGCGATT
ACCGACGTTG ATCTGCTCGT ACTGCCGATT GATGATATGC GCCGGTTGGT CGTCGAGCAT
CCGCTGCTGG CGATGGCGTT ACTGCGCGAA TTTGCCGGCC GCTTATGCCA CATGGTCAAT
CTGATCGATA ATATTGCCCT GCACAGCGTG CAGGGCCGTT TGGCACAATT GTTGCTTAAT
CGAGCGATTG CTTCTGAACA GGGTGAGTTT GTCGCTCCGC TCACCCAAGC CGAAATGGCA
GCGATGATCG ATACCGTGCG CGAAATGGTG AGCCGTACCC TTCATCAGTT TGAAGCACAA
GGCCTGATCC GCATCGAACG CGGTGCAATC GCGATCTGTG ATCGCGAAGG CTTGGCAGCA
TGTGCGGAAT CCTAG
 
Protein sequence
MSNERVAQLR RVSFCTHLPD HVVQALAMIA QPRSYQSGAV IVLAGEPPQA MYTIVAGRVK 
LVRIALNGRE QIVNVMGAGQ HFNTVPIFDH GPCPVNVQAI TDVDLLVLPI DDMRRLVVEH
PLLAMALLRE FAGRLCHMVN LIDNIALHSV QGRLAQLLLN RAIASEQGEF VAPLTQAEMA
AMIDTVREMV SRTLHQFEAQ GLIRIERGAI AICDREGLAA CAES