Gene Haur_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1297 
Symbol 
ID5733190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1505999 
End bp1506667 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content50% 
IMG OID641278437 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001544073 
Protein GI159897826 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAA ATGTTTTATT TGCCCATGTC AGTTTCACTC GCGATCTATC GCCAACGATT 
ATTGCTGCGC TGAGCAGCCA TGCCAATGAA CAAACCGTCG AGCGTGGTCA GATTATCACG
CTGGAGGGCG ACCCCGCCGT AGCAATGTAT CTGGTGTATA GCGGGCGAAT TAAGGTTGTG
CGTCATTCAA TCGAGGGCCG CGAGCATATT TTACACGTAG TTGAGGCCTA CGATCATTTT
AATACAGTCC CGATGTTTCG TGAAGCCCGC TGCCCAGCCA CCAGTGAAGC CTTAGTTACC
AGCCAATTAT TGGCAATTCC GCGTGAACAT ATCCGCCAAG TCGCCCAGCA ACACCCTGAA
TTAGCCTTGG CAATGTTGGG CGAATTCGCG AACCGTTTGC ATAATTTGGT TGGCTTAATT
GAAAATTTGG CCTTGCATAC GGTCAACGGG CGTTTGGCGC GTTTATTGTT GCAACAAGCT
GCATTAGCCG AACAAAATCC CAATCTTGCA CCTTTAACCC AAGCTGAAAT GGCCGCGCAT
ATTGGCTCAG TGCGTGAGAT GGTCGGGCGA GCCTTGAAGG CCTTTGATGC CCAAGGCTTA
ATTCGGCTTG AGCGCGGCAT AATCGAAATT ATCGATCCCC AAGGTTTAGC TGCCCAAGCT
GAGCTTTAG
 
Protein sequence
MDRNVLFAHV SFTRDLSPTI IAALSSHANE QTVERGQIIT LEGDPAVAMY LVYSGRIKVV 
RHSIEGREHI LHVVEAYDHF NTVPMFREAR CPATSEALVT SQLLAIPREH IRQVAQQHPE
LALAMLGEFA NRLHNLVGLI ENLALHTVNG RLARLLLQQA ALAEQNPNLA PLTQAEMAAH
IGSVREMVGR ALKAFDAQGL IRLERGIIEI IDPQGLAAQA EL