Gene CPR_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1062 
Symbol 
ID4204469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1210389 
End bp1211099 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content28% 
IMG OID642565618 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_698384 
Protein GI110802453 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GTGATTGCAA GGGCTATAAA AGTTGTTTAT GCAACAAAGA GCTTACTATA 
TTTAAGGATT TAACAGAGGA AGAATTTAAT AAATTAGCTA CTGGAATGAC ATGTTTTCAT
TTTAATAAAG GGGAATATAT ATGTTATGAA GGTGAAAAGC TTTCGAAGCT ATTTCTAATA
AGCAAGGGAA GTGTAAAGAC ATCAAAGCTT ACTAAGGGAG GAAAAGAGCA AATAATGCAC
ATATTCTCTG TAGGGGACTA TTTTGGAGAG ACAAGCCTAT TTAATAATGA GGGAGGAATT
TTATTTAATG CTATTGCTTT AAATGATGTT ATAGTTTGTG CTGTAGATAA GGATAAAGTT
GATAGTGTCT TAGAAGAAAA TCCAAGAATA GCTATAGTTG TTTTGAAATC CTTAACTAAT
CGTTTAAAGG ACACTGAAGA ATTTGCTCAT AAATTAGTAA CTAATGATGT TAGAGTTAGA
ATAGCATATA TGTTAAAAGA GTTTAAGAGA AAATATGGCA AAATAGAAAA TGGGGAAATA
TTTATTGATT TACCAATTAA TAGAGAAGAT ATGGCTAATT ATTGTGGTAT AACTAGAGAA
ACAATGAGTA GAAAACTCTC TATATTTGAG CACGAAGGAT TAATAGAAAT TAGAGGAAAT
AAATCTTTAA TAATAAAAGA CATAGAAAGA TTAAATAAAA TAATTTCATA G
 
Protein sequence
MKKCDCKGYK SCLCNKELTI FKDLTEEEFN KLATGMTCFH FNKGEYICYE GEKLSKLFLI 
SKGSVKTSKL TKGGKEQIMH IFSVGDYFGE TSLFNNEGGI LFNAIALNDV IVCAVDKDKV
DSVLEENPRI AIVVLKSLTN RLKDTEEFAH KLVTNDVRVR IAYMLKEFKR KYGKIENGEI
FIDLPINRED MANYCGITRE TMSRKLSIFE HEGLIEIRGN KSLIIKDIER LNKIIS