| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2593 |
|---|
| Symbol | |
|---|
| ID | 3672569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2668109 |
|---|
| End bp | 2668873 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637711299 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_316351 |
|---|
| Protein GI | 74318611 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.431237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.296758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCGC CCGCGTCCCC TCTTTCGCTC CTGCACGATG CGCCGCTCTT CGCAGGCGTC
GACGCCGGCC ATCTCGCCAC GCTGGCCCAG GCTGCGCGTT CGCGGGACGC GCGGGCCGGC
CAGCTGCTCT TCGCCGAAGG CGACGAGGCC CGCGCGTTCT ACCTCGTCGC GCAAGGCGAG
GTCCACCTCT ACCGGTTCTC GCCGCAGGGG GAGGAAAAGG TGTTCCAGAT GCTCGGGGAC
GGCGACCTGC TGGCCGAAGC CGCAATGTTT CTCAGCCCCG CGGTCTATCC GATGACGGCG
CGCGCCGTAC GCGACAGCAC GCTGTTCGCC GTGCCGCGGC AGGCATTGTT GTCGTTGTGC
GCGGCCTCGC CGCCCTTGAT GCTGACGCTC CTGTCCGCCC TGGCGAGACG CCTATACCAG
GCGATGAACC GCATCGACCA TCTCACCCTC AACAACGCCG GCCAGCGGCT CGTCGCCTAT
TTGCTTGATT TGCGGCGGCA ACAGCATGGC AACTGGATCA GCATTCCGGT GAATTTCGCC
GTCCTGGCGG CCCAACTCGG CATGACGCCC GAAACTCTGT CGCGTCTACT GCAGAAATTT
CGCCAGGACG GACTCCTGAG CGGCAAGGGG CGCACGCTGG TCCTGCTCGA CGCCGACATG
TTGTGTGAAA AGGTGGCGCT GCCCCGACAA GCCATGCGGC CACCCTCCCA CATCGGAGGC
AATCCTTCGA TGACCGGGTG CTGCAATCTC GCAGGCAAGC GGTGA
|
|---|
| Protein sequence | MASPASPLSL LHDAPLFAGV DAGHLATLAQ AARSRDARAG QLLFAEGDEA RAFYLVAQGE
VHLYRFSPQG EEKVFQMLGD GDLLAEAAMF LSPAVYPMTA RAVRDSTLFA VPRQALLSLC
AASPPLMLTL LSALARRLYQ AMNRIDHLTL NNAGQRLVAY LLDLRRQQHG NWISIPVNFA
VLAAQLGMTP ETLSRLLQKF RQDGLLSGKG RTLVLLDADM LCEKVALPRQ AMRPPSHIGG
NPSMTGCCNL AGKR
|
|---|
| |