| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3427 |
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| Symbol | |
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| ID | 5540926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4466418 |
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| End bp | 4467089 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895545 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001433495 |
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| Protein GI | 156743366 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0598833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00496827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCTCG AAATCGCAGA CATACGTCGT GCCGGATTGT TCGCCGATCT GCCAGAACCA
GACTGCGCAG CGCTGGCGTC GATTGCAGTG CGCGTGCGGC ATACTGCCGG TGAGATGCTC
TTTCTTGCCG GCGACCCATC ACCCGGTCTC TACGTGCTCC TCAGCGGGCG AGTGCGCCTA
TCGCGTCTCT CGCCAGGGGG TCGCGAGCAG GTCATTCATA TCGTCGAGCC CGGGCATCAT
TTCAATTCGG TGCCGGTGTT CGACGGCGGT CCGTGCCCGG TCAATGCAGC GGCTCAGACC
GACATCATAG CGCTGTTGTT TCCAGGAGAC CGTCTGCGCG CCCTCATTCT AGAGCATCCG
GTGGTGGCGC TGCGTCTCCT TGCAGATAGT TGCGGGTATC TGCGACGATT GGTCGATCTG
GTGGACGATC TGGCGCTGAC CACGGTTCAG GGACGCCTGG CGCGCCTGTT GCTGACGCAG
GCGGAAGCCG GTGAGCGCGG CGTTGTTCAG CCGCTCACCC AAAGCGAGAT AGCGGCGCGT
CTTGGCACTG TACGCGAGAT GGTCGGACGC TCGCTGAAAA CGTTCGAGGC CATGGGGTTG
ATCCGCATCG AGCGCGGCAC GATCATCATT ATCGACCGTG CTGCACTCGA ACGCGAAAGC
GAGCGTGGAT GA
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| Protein sequence | MPLEIADIRR AGLFADLPEP DCAALASIAV RVRHTAGEML FLAGDPSPGL YVLLSGRVRL
SRLSPGGREQ VIHIVEPGHH FNSVPVFDGG PCPVNAAAQT DIIALLFPGD RLRALILEHP
VVALRLLADS CGYLRRLVDL VDDLALTTVQ GRLARLLLTQ AEAGERGVVQ PLTQSEIAAR
LGTVREMVGR SLKTFEAMGL IRIERGTIII IDRAALERES ERG
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