More than 300 homologs were found in PanDaTox collection
for query gene Maqu_3081 on replicon NC_008740
Organism: Marinobacter aquaeolei VT8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  100 
 
 
249 aa  508  1e-143  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  35.21 
 
 
227 aa  131  1.0000000000000001e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  35.68 
 
 
227 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  33.33 
 
 
225 aa  125  5e-28  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  30.7 
 
 
272 aa  125  8.000000000000001e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  32.88 
 
 
232 aa  124  2e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009092  Shew_3331  Crp/FNR family transcriptional regulator  30.52 
 
 
258 aa  122  5e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  32.24 
 
 
227 aa  116  3.9999999999999997e-25  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  28.37 
 
 
250 aa  115  6.9999999999999995e-25  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  30.77 
 
 
229 aa  114  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  30.77 
 
 
229 aa  113  3e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  30.77 
 
 
229 aa  113  3e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  30.77 
 
 
230 aa  113  3e-24  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  30.77 
 
 
230 aa  113  3e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  30.77 
 
 
230 aa  113  3e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  30.77 
 
 
229 aa  113  3e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  30.77 
 
 
230 aa  113  3e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  32.98 
 
 
239 aa  110  2.0000000000000002e-23  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  31.25 
 
 
246 aa  105  5e-22  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  29.39 
 
 
231 aa  105  7e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  31.02 
 
 
222 aa  105  7e-22  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  31.02 
 
 
222 aa  105  7e-22  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  31.25 
 
 
229 aa  105  7e-22  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  30.52 
 
 
237 aa  103  2e-21  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  26.84 
 
 
252 aa  103  3e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  31.16 
 
 
232 aa  103  3e-21  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  28.38 
 
 
234 aa  103  4e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  26.5 
 
 
254 aa  101  1e-20  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  26.5 
 
 
254 aa  101  1e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  30.58 
 
 
243 aa  99.4  5e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  29.65 
 
 
225 aa  98.2  1e-19  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  28.95 
 
 
253 aa  97.1  2e-19  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  30.77 
 
 
228 aa  93.6  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  26.77 
 
 
233 aa  91.7  9e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  29.41 
 
 
245 aa  91.7  1e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  27.83 
 
 
254 aa  91.3  1e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  25.93 
 
 
236 aa  91.3  1e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  29.77 
 
 
225 aa  90.9  2e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  29.73 
 
 
224 aa  90.9  2e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  27.88 
 
 
225 aa  89.7  4e-17  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  28.71 
 
 
225 aa  89.4  5e-17  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2636  Crp/FNR family transcriptional regulator  29.52 
 
 
234 aa  89.4  5e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  28.71 
 
 
225 aa  89.4  5e-17  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  29.65 
 
 
238 aa  89  7e-17  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  27.23 
 
 
229 aa  87.4  2e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  27.27 
 
 
231 aa  87.4  2e-16  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  25 
 
 
240 aa  86.3  4e-16  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  29.44 
 
 
236 aa  85.9  6e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.43 
 
 
227 aa  85.5  7e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  28.38 
 
 
249 aa  85.1  0.000000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  29.25 
 
 
229 aa  84  0.000000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  26.82 
 
 
229 aa  83.2  0.000000000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  27.14 
 
 
241 aa  82.8  0.000000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_012850  Rleg_3301  transcriptional regulator, Crp/Fnr family  30.94 
 
 
227 aa  82.4  0.000000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306356 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  26.48 
 
 
230 aa  82  0.000000000000008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  24.54 
 
 
236 aa  81.6  0.000000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  29.89 
 
 
221 aa  81.3  0.00000000000001  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  29.26 
 
 
222 aa  81.3  0.00000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  28.97 
 
 
246 aa  81.6  0.00000000000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.24 
 
 
241 aa  80.5  0.00000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  25.77 
 
 
234 aa  80.1  0.00000000000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  29.44 
 
 
222 aa  78.6  0.00000000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  26.01 
 
 
227 aa  78.2  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  27.62 
 
 
227 aa  78.2  0.0000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  24 
 
 
229 aa  77.4  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  24.89 
 
 
225 aa  77.4  0.0000000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_011989  Avi_3466  regulator of Biofilm formation Fnr Family  28.44 
 
 
235 aa  77.8  0.0000000000002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  28.88 
 
 
231 aa  77  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  23.26 
 
 
236 aa  76.3  0.0000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  27.23 
 
 
230 aa  76.6  0.0000000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  26.24 
 
 
226 aa  76.3  0.0000000000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  24.2 
 
 
226 aa  75.9  0.0000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  27.01 
 
 
255 aa  75.9  0.0000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  26.27 
 
 
236 aa  76.3  0.0000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.93 
 
 
227 aa  76.3  0.0000000000005  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  25.12 
 
 
227 aa  75.9  0.0000000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  25 
 
 
254 aa  75.9  0.0000000000006  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  24.89 
 
 
223 aa  75.5  0.0000000000009  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  25.81 
 
 
241 aa  75.1  0.0000000000009  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  25.23 
 
 
228 aa  74.7  0.000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013172  Bfae_24470  cAMP-binding protein  26.09 
 
 
261 aa  73.9  0.000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  26.27 
 
 
241 aa  73.6  0.000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  22.69 
 
 
239 aa  73.2  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.14 
 
 
226 aa  72.4  0.000000000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  24.43 
 
 
231 aa  72.4  0.000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_011662  Tmz1t_4014  transcriptional regulator, Crp/Fnr family  25.98 
 
 
233 aa  72  0.000000000008  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2709  transcriptional activator FtrB  25.58 
 
 
232 aa  72  0.000000000008  Maricaulis maris MCS10  Bacteria  normal  normal  0.0829617 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  22.82 
 
 
243 aa  72  0.000000000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008025  Dgeo_0780  Crp/FNR family transcriptional regulator  28.69 
 
 
231 aa  72  0.000000000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.390237  normal 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  24.19 
 
 
229 aa  71.2  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  26.03 
 
 
240 aa  71.2  0.00000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  28.97 
 
 
223 aa  71.6  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  24.88 
 
 
226 aa  70.9  0.00000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_009621  Smed_5927  cyclic nucleotide-binding protein  26.9 
 
 
226 aa  70.5  0.00000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.514964 
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  23.45 
 
 
238 aa  70.1  0.00000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_011662  Tmz1t_2638  transcriptional regulator, Crp/Fnr family  25.12 
 
 
222 aa  68.2  0.0000000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0689  conserved hypothetical protein, putative transcriptional regulator  23.53 
 
 
200 aa  68.2  0.0000000001  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  22.32 
 
 
238 aa  67.8  0.0000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  24.44 
 
 
234 aa  67.8  0.0000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0301  transcriptional activator FtrB  26.94 
 
 
236 aa  67  0.0000000003  Brucella suis 1330  Bacteria  normal  0.025844  n/a   
 
 
-
 
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