Gene Pcar_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2562 
Symbol 
ID3725265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3009089 
End bp3009757 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID637752173 
Productcyclic AMP receptor protein 
Protein accessionYP_357970 
Protein GI77920155 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.553837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGAC AAAAAGCCAT CAATCAATTT CTGGTCCGTT TTTTCGGGTC CAGTGAACCG 
GACCTGTATG AACTCATCGA CGGAATCAGC GTATTCCAAA AACGGCGACG TAAGGAAGTG
TTGTTTCTGG AGGGGGAAGA GGGGCATGCC GTGCACTTTT TACTGCACGG ACGCGTCAAA
CTCTACCGTG CCAATGAGGA AGGCAAAGAA GCGGTCATCC GGTTTGTGCA GCCGGGCGAG
TTTTTTGCGG AAATCCTGCT CGATCTGCAA AACCGCTACC CGGTTAACGC CATGACGCTG
GAGGATTGCT CGCTGTTGCT CATCGATGTC CACAAACTGT TCGGTCGCCT GCAACAGGCG
CCGGACCTGG CCATGCATCT GGTGGGCACC CTGTCCCAAC GTCTGATTTT TATGCTCAAG
CGTGTGGAAC AACTGGCGAT CGTCGATATT CGGGAACGTT TTATGGGCTA CCTCAGAGCC
CTGGATGAAA AACACCGTAC CGGCGTAGTG CAACTTCCGG CTCCCAAGCG CGAAATCGCT
CTGCTGCTCG GGACCACTCC GGAAACTTTT TCCCGCTTGC TGAAGAAACT CTCGGAAGAA
GAGGTCATCC GGGTCAGCGG AAAATCGATT CAACTGCTGG CAGGGTTCCA TCGCAAAACG
GGTAATTAA
 
Protein sequence
MERQKAINQF LVRFFGSSEP DLYELIDGIS VFQKRRRKEV LFLEGEEGHA VHFLLHGRVK 
LYRANEEGKE AVIRFVQPGE FFAEILLDLQ NRYPVNAMTL EDCSLLLIDV HKLFGRLQQA
PDLAMHLVGT LSQRLIFMLK RVEQLAIVDI RERFMGYLRA LDEKHRTGVV QLPAPKREIA
LLLGTTPETF SRLLKKLSEE EVIRVSGKSI QLLAGFHRKT GN