| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1012 |
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| Symbol | |
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| ID | 3969661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1111031 |
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| End bp | 1111756 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924125 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_530897 |
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| Protein GI | 90422527 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.88102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.736744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCGA AACTGACCGG CGGTGATCTG CAGATCATCA CGCGGATCGC CGTCTTTCGT
GGACTAAAGG CAGAAACCGT CGCGCACATG ATCGCACCGG CTACGGCGAT CATCGTGCGG
GCGCGCGAGC CAATCGTTCC GCAGGACGAA CCGGCGACCG CTTTCTTTAT TGTCATCGAC
GGTTGGGTGA AGCTGTTTCG CAGCAACGTC GCCGGCGACG AATCGGTCAT CGAGATCATG
ACCAAAGGCG GCAGTTTCGC GGAGGCCGCG GCGCTCACCG GCAGTCGCTA TCTTGCGACG
GCGGAGGCTG TCACCGAAGC CCGCGTGGCG CGAATTCCGG CCGATCATTT GGTCCGTTGC
ATTCGCCACA ATCCCGATAT TTCGGTACCG ATGATCGCCT CGATCTGTCA GCAGATGCAC
TATCTGGTGC AGCGGGTGGA GCAGCTCAAG GCGCAGAGCG GTGTGCAGCG TCTTGCGGAA
TTCCTCGCTT CGCTCGCGCT GACGGAGCAG GGGGCCTGTA GGCTGGTCTT GCCCTACGAC
AAGACCTTGA TCGCGGGGGA GTTGGGTCTG ACCCCAGAGT CGTTGTCGCG GGCCTTCGCA
AAACTGCGGA GCATCGGCGT CACGGTCGTT GCGTCCCAAG TTGCGGTCCG CGACGTAGCC
AGATTGCGTA AGCTGGCAGC CGACGGTCGC AGCGCCGTGC GCGGCACGCT ACAGGTGATG
CGCTAG
|
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| Protein sequence | MASKLTGGDL QIITRIAVFR GLKAETVAHM IAPATAIIVR AREPIVPQDE PATAFFIVID
GWVKLFRSNV AGDESVIEIM TKGGSFAEAA ALTGSRYLAT AEAVTEARVA RIPADHLVRC
IRHNPDISVP MIASICQQMH YLVQRVEQLK AQSGVQRLAE FLASLALTEQ GACRLVLPYD
KTLIAGELGL TPESLSRAFA KLRSIGVTVV ASQVAVRDVA RLRKLAADGR SAVRGTLQVM
R
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