Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1454 |
Symbol | |
ID | 6162848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1534856 |
End bp | 1535614 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641664208 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_001790487 |
Protein GI | 171058138 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAACA CCCGTTTCGA TCTGCCGCGT TACCTGGCGG TGCTGCCGCT GTTCCAGGAA ATGACACCGG CCGAGCTGCA GCGCCTGGCC GAAGGCTGCC GACTGCGCCG CATGGTGCGT GGCGACAACA TCTTCCGCAT CGGCGAGCCG TGCGAGGAGT TCCACGTCAC GGTGATGGGA CAGGTCAAGC TGTACGCGAT CTCGCCGGCC GGCCAGGAAA AGGTCATCGA GCTGATCGGC CCCGGCAACA GCTTCGCCGA GGCGCTGATG TTCACCGGCA AGCCCTACAT CATCAACGCC CAGGCACTCA GCGACACGCT GCTGCTGAGC GTGGGCAAGG CCGCGGTGCT CGGCGAGATC GAGCGCGACT CGCGCTTCGC GATGCGCATG CTGGCGGGCA TCTCGCGGCG CCTGCACGGC CTCGTGCACG ACGTGCAGGC CTATGCGCTG CACAGCGGCA TGCAGCGCGT GATCGGCTAC CTGCTGCGCG ACCTGCCCGA AGAAGGCGAC GACGCTGCCG AGATGACGCT GGCCGGTGCC GGCTGTGCGC CGATGTGCAA GGACGAATCT GTGCCGCCGC GCGAGCTGCG CGTGTCGCTG CCGGTCAGCA AGGCGACGAT CGCCTCGCGC CTGTCGCTGA CGCCCGAATA CTTCTCGCGC GTGCTGCACG AGCTCGAAGG CGCCGGCCTG ATCCAGATCG ACAAGCGCGA GATCTGCATC CCCGACCCGG GCCGGCTGGC GCGCCACAAC ATGCAGTAG
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Protein sequence | MDNTRFDLPR YLAVLPLFQE MTPAELQRLA EGCRLRRMVR GDNIFRIGEP CEEFHVTVMG QVKLYAISPA GQEKVIELIG PGNSFAEALM FTGKPYIINA QALSDTLLLS VGKAAVLGEI ERDSRFAMRM LAGISRRLHG LVHDVQAYAL HSGMQRVIGY LLRDLPEEGD DAAEMTLAGA GCAPMCKDES VPPRELRVSL PVSKATIASR LSLTPEYFSR VLHELEGAGL IQIDKREICI PDPGRLARHN MQ
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