| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1454 |
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| Symbol | |
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| ID | 6162848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1534856 |
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| End bp | 1535614 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664208 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001790487 |
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| Protein GI | 171058138 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACAACA CCCGTTTCGA TCTGCCGCGT TACCTGGCGG TGCTGCCGCT GTTCCAGGAA
ATGACACCGG CCGAGCTGCA GCGCCTGGCC GAAGGCTGCC GACTGCGCCG CATGGTGCGT
GGCGACAACA TCTTCCGCAT CGGCGAGCCG TGCGAGGAGT TCCACGTCAC GGTGATGGGA
CAGGTCAAGC TGTACGCGAT CTCGCCGGCC GGCCAGGAAA AGGTCATCGA GCTGATCGGC
CCCGGCAACA GCTTCGCCGA GGCGCTGATG TTCACCGGCA AGCCCTACAT CATCAACGCC
CAGGCACTCA GCGACACGCT GCTGCTGAGC GTGGGCAAGG CCGCGGTGCT CGGCGAGATC
GAGCGCGACT CGCGCTTCGC GATGCGCATG CTGGCGGGCA TCTCGCGGCG CCTGCACGGC
CTCGTGCACG ACGTGCAGGC CTATGCGCTG CACAGCGGCA TGCAGCGCGT GATCGGCTAC
CTGCTGCGCG ACCTGCCCGA AGAAGGCGAC GACGCTGCCG AGATGACGCT GGCCGGTGCC
GGCTGTGCGC CGATGTGCAA GGACGAATCT GTGCCGCCGC GCGAGCTGCG CGTGTCGCTG
CCGGTCAGCA AGGCGACGAT CGCCTCGCGC CTGTCGCTGA CGCCCGAATA CTTCTCGCGC
GTGCTGCACG AGCTCGAAGG CGCCGGCCTG ATCCAGATCG ACAAGCGCGA GATCTGCATC
CCCGACCCGG GCCGGCTGGC GCGCCACAAC ATGCAGTAG
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| Protein sequence | MDNTRFDLPR YLAVLPLFQE MTPAELQRLA EGCRLRRMVR GDNIFRIGEP CEEFHVTVMG
QVKLYAISPA GQEKVIELIG PGNSFAEALM FTGKPYIINA QALSDTLLLS VGKAAVLGEI
ERDSRFAMRM LAGISRRLHG LVHDVQAYAL HSGMQRVIGY LLRDLPEEGD DAAEMTLAGA
GCAPMCKDES VPPRELRVSL PVSKATIASR LSLTPEYFSR VLHELEGAGL IQIDKREICI
PDPGRLARHN MQ
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