More than 300 homologs were found in PanDaTox collection
for query gene Tmz1t_2638 on replicon NC_011662
Organism: Thauera sp. MZ1T



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011662  Tmz1t_2638  transcriptional regulator, Crp/Fnr family  100 
 
 
222 aa  438  9.999999999999999e-123  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  35.16 
 
 
227 aa  116  1.9999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  31.22 
 
 
245 aa  113  2.0000000000000002e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  30.37 
 
 
231 aa  112  5e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  36.32 
 
 
229 aa  110  1.0000000000000001e-23  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  36.32 
 
 
230 aa  110  1.0000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  36.32 
 
 
229 aa  110  1.0000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  36.32 
 
 
229 aa  110  1.0000000000000001e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  34.67 
 
 
225 aa  110  1.0000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  36.32 
 
 
229 aa  110  1.0000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  36.32 
 
 
230 aa  110  1.0000000000000001e-23  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  36.32 
 
 
230 aa  110  1.0000000000000001e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  36.32 
 
 
230 aa  110  1.0000000000000001e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  34.67 
 
 
225 aa  110  1.0000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  33.02 
 
 
225 aa  108  9.000000000000001e-23  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  33.02 
 
 
225 aa  107  2e-22  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  33.33 
 
 
225 aa  106  3e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  33.82 
 
 
243 aa  105  6e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  33.97 
 
 
234 aa  105  6e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  31.92 
 
 
232 aa  104  9e-22  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  32.08 
 
 
225 aa  103  2e-21  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  26.76 
 
 
233 aa  100  1e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  29.72 
 
 
228 aa  99  6e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  30.09 
 
 
253 aa  96.7  3e-19  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  31.58 
 
 
222 aa  94  2e-18  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  31.58 
 
 
222 aa  94  2e-18  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  28.31 
 
 
248 aa  92.4  5e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  29.91 
 
 
252 aa  91.7  8e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  35.29 
 
 
237 aa  91.7  9e-18  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  27.45 
 
 
224 aa  90.5  2e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  28.71 
 
 
227 aa  90.1  2e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  31.91 
 
 
246 aa  90.1  3e-17  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  31.91 
 
 
229 aa  89.7  3e-17  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  28.42 
 
 
228 aa  89.4  4e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  28.43 
 
 
229 aa  88.6  6e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  33.15 
 
 
232 aa  87.8  1e-16  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_007298  Daro_3322  cyclic nucleotide-binding  30.92 
 
 
495 aa  85.5  5e-16  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000319874 
 
 
-
 
NC_011662  Tmz1t_4014  transcriptional regulator, Crp/Fnr family  32.11 
 
 
233 aa  85.1  7e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  29.41 
 
 
243 aa  84.7  0.000000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  26.77 
 
 
229 aa  84.3  0.000000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  31.02 
 
 
254 aa  83.6  0.000000000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  27.85 
 
 
254 aa  84  0.000000000000002  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  27.85 
 
 
254 aa  84  0.000000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  28.42 
 
 
272 aa  83.6  0.000000000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  28.8 
 
 
241 aa  82  0.000000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  27.86 
 
 
227 aa  80.5  0.00000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  27.17 
 
 
230 aa  80.1  0.00000000000003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_012857  Rpic12D_4617  transcriptional regulator, Crp/Fnr family  28.91 
 
 
243 aa  79.7  0.00000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.652735  normal 
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  26.74 
 
 
239 aa  79.7  0.00000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_010678  Rpic_4483  transcriptional regulator, Crp/Fnr family  28.91 
 
 
243 aa  79.7  0.00000000000003  Ralstonia pickettii 12J  Bacteria  normal  normal  0.183908 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.01 
 
 
231 aa  79.3  0.00000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  25.52 
 
 
229 aa  79.3  0.00000000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  25.7 
 
 
236 aa  79  0.00000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  24.64 
 
 
236 aa  79  0.00000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  28.43 
 
 
227 aa  78.6  0.00000000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  28.43 
 
 
227 aa  78.6  0.00000000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  29.38 
 
 
235 aa  78.6  0.00000000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  23.08 
 
 
230 aa  77.8  0.0000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  24.49 
 
 
226 aa  77.8  0.0000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1939  transcriptional regulator, Crp/Fnr family  32.6 
 
 
235 aa  77  0.0000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  30.29 
 
 
229 aa  77  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_009092  Shew_3331  Crp/FNR family transcriptional regulator  27.31 
 
 
258 aa  77  0.0000000000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  30.9 
 
 
241 aa  76.6  0.0000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_009636  Smed_2376  CRP/FNR family transcriptional regulator  30.26 
 
 
226 aa  76.3  0.0000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.253524 
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  30.81 
 
 
255 aa  75.9  0.0000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1929  Crp/FNR family transcriptional regulator  30.06 
 
 
235 aa  75.9  0.0000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.589711  n/a   
 
 
-
 
NC_008542  Bcen2424_2541  Crp/FNR family transcriptional regulator  30.06 
 
 
235 aa  75.9  0.0000000000005  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000812643  n/a   
 
 
-
 
NC_009656  PSPA7_0351  putative transcriptional regulator  28.57 
 
 
228 aa  75.5  0.0000000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2636  Crp/FNR family transcriptional regulator  32.12 
 
 
234 aa  75.1  0.0000000000008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.06 
 
 
225 aa  75.1  0.0000000000008  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  25 
 
 
241 aa  74.7  0.000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_007575  Suden_1312  CRP/FNR family transcriptional regulator  23.46 
 
 
209 aa  73.2  0.000000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000433355  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  25.38 
 
 
226 aa  73.2  0.000000000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  25.39 
 
 
229 aa  72.8  0.000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007492  Pfl01_0199  Crp/FNR family transcriptional regulator  28.49 
 
 
227 aa  72.8  0.000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  27.86 
 
 
222 aa  72.8  0.000000000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.55 
 
 
225 aa  72.8  0.000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_012803  Mlut_09560  cAMP-binding protein  29.76 
 
 
231 aa  72.8  0.000000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.348668  n/a   
 
 
-
 
NC_008463  PA14_03580  putative transcriptional regulator  29.57 
 
 
228 aa  72.8  0.000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000980911  hitchhiker  0.0000000000977836 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  29.67 
 
 
235 aa  72.4  0.000000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_013132  Cpin_2386  transcriptional regulator, Crp/Fnr family  25.63 
 
 
230 aa  72.4  0.000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0267635  normal  0.395563 
 
 
-
 
NC_008390  Bamb_2589  Crp/FNR family transcriptional regulator  29.67 
 
 
235 aa  72.4  0.000000000006  Burkholderia ambifaria AMMD  Bacteria  normal  0.0679634  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  28.35 
 
 
238 aa  71.2  0.00000000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  21.96 
 
 
225 aa  71.2  0.00000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  26.87 
 
 
254 aa  71.2  0.00000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_012850  Rleg_3301  transcriptional regulator, Crp/Fnr family  30.77 
 
 
227 aa  71.2  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306356 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  25.35 
 
 
227 aa  70.1  0.00000000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3444  cyclic nucleotide-binding  25.27 
 
 
250 aa  70.5  0.00000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_7045  transcriptional regulator, Crp/Fnr family  28.12 
 
 
237 aa  70.5  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal  0.0108856 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  24.34 
 
 
227 aa  70.1  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  24.34 
 
 
227 aa  70.1  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009621  Smed_5927  cyclic nucleotide-binding protein  27.87 
 
 
226 aa  69.7  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.514964 
 
 
-
 
NC_007952  Bxe_B0027  Crp/FNR family transcriptional regulator  27.27 
 
 
237 aa  69.7  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  23.65 
 
 
234 aa  69.7  0.00000000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  24.32 
 
 
236 aa  69.3  0.00000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  26.21 
 
 
224 aa  68.9  0.00000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  31.25 
 
 
227 aa  68.9  0.00000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  27.85 
 
 
223 aa  68.6  0.00000000007  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  25.12 
 
 
249 aa  68.2  0.00000000009  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  25.46 
 
 
225 aa  67.4  0.0000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
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