Gene Slin_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3553 
Symbol 
ID8727306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4285585 
End bp4286631 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003388359 
Protein GI284038429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.528491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TTTTGTTGAT CGAAGACAAT GAAGCTATCC GCGAAAATAC AGCCGAGATC 
CTTGAGCTGA CGGGCTATAC CGTCGAGACT GCCGAAAATG GTAAGCTGGG GGTTGAAAAA
GCCCTTGCCA GGAAGCCCGA TCTGGTCATC TGCGACATTA TGATGCCGGT ACTGGATGGC
TACGGGGTGC TGCATATTTT TAATAAAAAT CCACAGCTGT CGGGGGTGCC GTTCATCTTC
CTGACGGCTA AAACGGAACG GAACGACCTG CGAAAAGGCA TGGAGCTGGG TGCCGACGAC
TACCTGACCA AACCGTTCGA TGAATCCGAA CTGCTTAGTG CGATTGAAGG GCGGCTGAAC
CGATTTGCGC ACCTTAAGCC GGACTATGAC CTGGTGCACG AAGGACTCGA TCAGTTCATG
GACGATGCCC GTAGGGTAGG GAATCTGCAA AGCCTGTCGG CCGATCGTAA GGTGCATGCG
GTGCGGAAGA AGCAGTATAT CTATTCGGAA GGAGACGAAG CCACCCGTCT GTATTTTCTT
AAATCGGGTC GGGTCAAAGC GGTTCGGATC AATACCGACG GCAAAGAGCT TATCATGGAA
ATCTATACCC CCGGTGATTT TTTTGGCTAT CTCCCTCTCC TCGATGGTCG CCGGTATACC
GAATCGGCCA TAACGATGGA GGATTCGGAA CTGCATTATA TCCCGATGGA GGATTTTCAG
CAGTTGTTAC TGGCCAATCA GGAAGTAAGT CAGCATTTTA TCCAGTTGCT GGCTGGCCGC
GTGGCCGAAC GCGAAGAGAA GCTGGTGGGT ATGGCTTATA ATTCGCTCCG GCGCCGGGTA
GCGGATACGG TCCTGCGGCT GCATAATCAG CATAACGGTG AGATTATCCA GCTCTCGCGG
GATGATCTGG CCGCAATTGT TGGTACCGCT ACCGAATCCC TGATTCGTAC CCTGAGCGAG
TTCCGGCAGG ATGGCCTCAT CGAAGTGATT GCGCCAGCGG GTATTCGGGT GCTGCAACCT
GAAAAGCTAC GCCGGGCCAA CTGGTAA
 
Protein sequence
MKTILLIEDN EAIRENTAEI LELTGYTVET AENGKLGVEK ALARKPDLVI CDIMMPVLDG 
YGVLHIFNKN PQLSGVPFIF LTAKTERNDL RKGMELGADD YLTKPFDESE LLSAIEGRLN
RFAHLKPDYD LVHEGLDQFM DDARRVGNLQ SLSADRKVHA VRKKQYIYSE GDEATRLYFL
KSGRVKAVRI NTDGKELIME IYTPGDFFGY LPLLDGRRYT ESAITMEDSE LHYIPMEDFQ
QLLLANQEVS QHFIQLLAGR VAEREEKLVG MAYNSLRRRV ADTVLRLHNQ HNGEIIQLSR
DDLAAIVGTA TESLIRTLSE FRQDGLIEVI APAGIRVLQP EKLRRANW