More than 300 homologs were found in PanDaTox collection
for query gene CCC13826_1550 on replicon NC_009802
Organism: Campylobacter concisus 13826



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009802  CCC13826_1550  protein YieJ  100 
 
 
212 aa  427  1e-119  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0436  transcription regulator  74.06 
 
 
214 aa  333  9e-91  Campylobacter curvus 525.92  Bacteria  normal  0.0316636  n/a   
 
 
-
 
NC_008599  CFF8240_0798  transcription regulator  54.46 
 
 
213 aa  243  1.9999999999999999e-63  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.00000000000892201  n/a   
 
 
-
 
NC_013512  Sdel_0691  cyclic nucleotide-binding protein  47.18 
 
 
212 aa  192  3e-48  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  41.31 
 
 
219 aa  189  2e-47  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_009714  CHAB381_1382  transcription regulator  44.44 
 
 
213 aa  177  1e-43  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  42.36 
 
 
223 aa  172  1.9999999999999998e-42  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_007575  Suden_1312  CRP/FNR family transcriptional regulator  38.83 
 
 
209 aa  144  1e-33  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000433355  n/a   
 
 
-
 
NC_012039  Cla_0689  conserved hypothetical protein, putative transcriptional regulator  36.36 
 
 
200 aa  109  3e-23  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  33.51 
 
 
198 aa  105  4e-22  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_007575  Suden_1296  CRP/FNR family transcriptional regulator  29.84 
 
 
218 aa  102  3e-21  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00112875  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  32.35 
 
 
229 aa  102  4e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_013512  Sdel_0710  cyclic nucleotide-binding protein  29.72 
 
 
221 aa  101  8e-21  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000071434  n/a   
 
 
-
 
NC_008787  CJJ81176_0491  putative transcriptional regulator  32.46 
 
 
201 aa  101  1e-20  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.0132873  n/a   
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  32.2 
 
 
198 aa  99.4  4e-20  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_007575  Suden_1512  cyclic nucleotide-binding domain-containing protein  27.32 
 
 
221 aa  96.7  2e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00000347396  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.24 
 
 
229 aa  94.4  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  25.5 
 
 
248 aa  92.4  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  27.23 
 
 
228 aa  91.3  1e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.21 
 
 
225 aa  90.1  2e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  29.08 
 
 
227 aa  89.7  3e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  28.44 
 
 
226 aa  89.7  3e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  27.14 
 
 
236 aa  89.4  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.64 
 
 
231 aa  87.4  1e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  27.73 
 
 
230 aa  87.8  1e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  29.44 
 
 
226 aa  86.3  3e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  22.38 
 
 
228 aa  85.9  4e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  26.96 
 
 
227 aa  85.5  5e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  25.74 
 
 
229 aa  85.1  6e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  24.17 
 
 
226 aa  85.1  6e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  30.46 
 
 
222 aa  85.1  7e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  25.74 
 
 
246 aa  84.7  9e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  29.28 
 
 
227 aa  84.7  9e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  23.92 
 
 
228 aa  84.7  9e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  25.81 
 
 
227 aa  84.3  0.000000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.98 
 
 
227 aa  83.6  0.000000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.88 
 
 
219 aa  83.6  0.000000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  26.48 
 
 
225 aa  83.2  0.000000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  21.9 
 
 
228 aa  83.2  0.000000000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  24.31 
 
 
224 aa  83.2  0.000000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  26.98 
 
 
222 aa  82.8  0.000000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.73 
 
 
225 aa  82.4  0.000000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  24.04 
 
 
243 aa  82  0.000000000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  24.88 
 
 
227 aa  80.9  0.00000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  24.06 
 
 
223 aa  78.6  0.00000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  20.21 
 
 
223 aa  78.6  0.00000000000007  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  26.92 
 
 
229 aa  78.2  0.00000000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  23.76 
 
 
225 aa  78.2  0.00000000000008  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  20.48 
 
 
228 aa  78.2  0.00000000000009  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  20.39 
 
 
232 aa  77.8  0.0000000000001  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  22.33 
 
 
254 aa  76.6  0.0000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  27.32 
 
 
222 aa  77.4  0.0000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  23.68 
 
 
234 aa  77  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  27.32 
 
 
222 aa  77.4  0.0000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  26.92 
 
 
226 aa  76.3  0.0000000000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  22.82 
 
 
225 aa  76.3  0.0000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  24.64 
 
 
225 aa  76.3  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  25.59 
 
 
225 aa  76.3  0.0000000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  26.7 
 
 
230 aa  76.3  0.0000000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  25.45 
 
 
253 aa  75.9  0.0000000000004  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  30.32 
 
 
248 aa  75.5  0.0000000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  21.43 
 
 
226 aa  75.9  0.0000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  27.8 
 
 
241 aa  75.5  0.0000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  28.3 
 
 
227 aa  75.1  0.0000000000007  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  25.11 
 
 
254 aa  75.1  0.0000000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  24.76 
 
 
225 aa  74.7  0.000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  30.77 
 
 
248 aa  73.9  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  23.58 
 
 
242 aa  73.9  0.000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  25 
 
 
224 aa  73.2  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.5 
 
 
239 aa  73.6  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  23.38 
 
 
231 aa  73.9  0.000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  22.17 
 
 
225 aa  73.6  0.000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  20.48 
 
 
225 aa  73.6  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  28.77 
 
 
251 aa  72.8  0.000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  28.77 
 
 
251 aa  72.8  0.000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  28.77 
 
 
251 aa  72.8  0.000000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  28.77 
 
 
251 aa  72.8  0.000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  22.45 
 
 
228 aa  73.2  0.000000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_008025  Dgeo_0780  Crp/FNR family transcriptional regulator  27.23 
 
 
231 aa  73.2  0.000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.390237  normal 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  21.57 
 
 
227 aa  73.2  0.000000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_010678  Rpic_4483  transcriptional regulator, Crp/Fnr family  23.2 
 
 
243 aa  73.2  0.000000000003  Ralstonia pickettii 12J  Bacteria  normal  normal  0.183908 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  18.05 
 
 
222 aa  73.2  0.000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_012857  Rpic12D_4617  transcriptional regulator, Crp/Fnr family  23.2 
 
 
243 aa  73.2  0.000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.652735  normal 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  29.41 
 
 
248 aa  72.4  0.000000000004  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  27.01 
 
 
236 aa  72.8  0.000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5122  Crp/FNR family transcriptional regulator  29.86 
 
 
248 aa  72.4  0.000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5737  Crp/FNR family transcriptional regulator  29.86 
 
 
248 aa  72.4  0.000000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.188641 
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  27.18 
 
 
245 aa  71.6  0.000000000007  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  28.3 
 
 
251 aa  71.6  0.000000000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  18.57 
 
 
225 aa  72  0.000000000007  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  28.3 
 
 
251 aa  71.6  0.000000000008  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  32 
 
 
226 aa  71.6  0.000000000008  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  28.3 
 
 
251 aa  71.6  0.000000000008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  25.49 
 
 
234 aa  70.9  0.00000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3367  Crp/FNR family transcriptional regulator  22.17 
 
 
230 aa  71.2  0.00000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  24.51 
 
 
237 aa  71.2  0.00000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  29.41 
 
 
249 aa  70.9  0.00000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  29.44 
 
 
249 aa  70.1  0.00000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  24 
 
 
235 aa  70.1  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  29.27 
 
 
630 aa  69.3  0.00000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>