More than 300 homologs were found in PanDaTox collection
for query gene Haur_2884 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  100 
 
 
218 aa  422  1e-117  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  56.31 
 
 
218 aa  207  8e-53  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  54.55 
 
 
224 aa  207  1e-52  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_011831  Cagg_2153  transcriptional regulator, Crp/Fnr family  53.74 
 
 
216 aa  182  4.0000000000000006e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0015242 
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  35.38 
 
 
222 aa  129  3e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  42.61 
 
 
223 aa  126  2.0000000000000002e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  33.33 
 
 
224 aa  126  3e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  33.93 
 
 
229 aa  115  6e-25  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  32.11 
 
 
230 aa  110  2.0000000000000002e-23  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  32.13 
 
 
229 aa  109  3e-23  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  33.18 
 
 
229 aa  108  4.0000000000000004e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.56 
 
 
225 aa  108  7.000000000000001e-23  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  30.69 
 
 
231 aa  108  8.000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  32.42 
 
 
241 aa  105  4e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  36.36 
 
 
225 aa  105  5e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  36.36 
 
 
225 aa  103  1e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  28.37 
 
 
243 aa  102  6e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  29.78 
 
 
225 aa  100  1e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  36.53 
 
 
224 aa  100  2e-20  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  34.27 
 
 
229 aa  97.4  1e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  31.53 
 
 
234 aa  97.1  2e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  32.11 
 
 
226 aa  96.7  2e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  28.77 
 
 
227 aa  95.9  4e-19  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  32.12 
 
 
231 aa  95.5  6e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  31.05 
 
 
227 aa  94.7  9e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  29.38 
 
 
224 aa  94.4  1e-18  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  30.8 
 
 
224 aa  94.4  1e-18  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  26.76 
 
 
220 aa  94  2e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  27.4 
 
 
227 aa  92.4  4e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_011830  Dhaf_0880  transcriptional regulator, Crp/Fnr family  31.03 
 
 
219 aa  92  5e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.812688  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  31.19 
 
 
225 aa  92.4  5e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  31.58 
 
 
228 aa  92.4  5e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  29.52 
 
 
227 aa  92  6e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  33.03 
 
 
225 aa  91.7  7e-18  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0303  transcriptional regulator, Crp/Fnr family  27.37 
 
 
228 aa  91.7  8e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  28.64 
 
 
230 aa  90.5  2e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  35.59 
 
 
228 aa  90.1  2e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  31.8 
 
 
225 aa  89.4  4e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  32.54 
 
 
225 aa  89.4  4e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  33.33 
 
 
226 aa  89  5e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  31.05 
 
 
229 aa  88.6  7e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32.57 
 
 
226 aa  88.2  9e-17  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  32.55 
 
 
228 aa  87.8  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  25.24 
 
 
219 aa  87  2e-16  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.8 
 
 
224 aa  86.7  2e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.69 
 
 
226 aa  86.7  2e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  31.82 
 
 
225 aa  87  2e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  25.25 
 
 
218 aa  86.7  3e-16  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  29.36 
 
 
236 aa  85.9  4e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  35.38 
 
 
237 aa  85.5  6e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  30.84 
 
 
225 aa  85.5  6e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  30.45 
 
 
225 aa  85.1  8e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  35.32 
 
 
228 aa  84.7  9e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.11 
 
 
242 aa  84.3  0.000000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  25.91 
 
 
240 aa  84  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  34.58 
 
 
225 aa  83.6  0.000000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  29.9 
 
 
236 aa  82.8  0.000000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  29.9 
 
 
254 aa  83.2  0.000000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_009441  Fjoh_2535  CRP/FNR family transcriptional regulator  25.55 
 
 
226 aa  83.2  0.000000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  25.99 
 
 
226 aa  82.4  0.000000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.4 
 
 
226 aa  82  0.000000000000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  32.84 
 
 
230 aa  81.3  0.000000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  27.55 
 
 
239 aa  80.9  0.00000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.55 
 
 
227 aa  81.3  0.00000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  31.98 
 
 
239 aa  81.3  0.00000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  32.2 
 
 
223 aa  81.3  0.00000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  28.86 
 
 
214 aa  80.5  0.00000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  28.11 
 
 
352 aa  80.5  0.00000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  29.36 
 
 
229 aa  80.5  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  30.81 
 
 
228 aa  80.1  0.00000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  28.08 
 
 
223 aa  79  0.00000000000005  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  29.67 
 
 
254 aa  79  0.00000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_009511  Swit_3029  CRP/FNR family transcriptional regulator  27.91 
 
 
228 aa  78.6  0.00000000000007  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  32.73 
 
 
224 aa  78.6  0.00000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  25.36 
 
 
236 aa  78.6  0.00000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25 
 
 
247 aa  78.6  0.00000000000008  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  27.23 
 
 
222 aa  78.6  0.00000000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  35.8 
 
 
228 aa  78.2  0.00000000000009  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  31.43 
 
 
224 aa  77.8  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  29.52 
 
 
234 aa  78.2  0.0000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  24.89 
 
 
236 aa  77.8  0.0000000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  27.14 
 
 
220 aa  77  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  29.55 
 
 
225 aa  76.6  0.0000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  28.57 
 
 
254 aa  77  0.0000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  28.7 
 
 
243 aa  77  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  29.44 
 
 
238 aa  77  0.0000000000002  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  24.06 
 
 
238 aa  76.6  0.0000000000002  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  33.49 
 
 
225 aa  76.3  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  24.89 
 
 
236 aa  76.6  0.0000000000003  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  28.17 
 
 
226 aa  75.9  0.0000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_009441  Fjoh_4447  CRP/FNR family transcriptional regulator  25.5 
 
 
227 aa  75.9  0.0000000000005  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  33.03 
 
 
225 aa  75.9  0.0000000000005  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  27.36 
 
 
238 aa  75.5  0.0000000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  23.53 
 
 
236 aa  75.5  0.0000000000006  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.1 
 
 
220 aa  75.5  0.0000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  32.55 
 
 
224 aa  75.5  0.0000000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  32.27 
 
 
228 aa  75.1  0.0000000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.58 
 
 
226 aa  75.1  0.0000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  27.01 
 
 
232 aa  75.1  0.0000000000008  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  27.36 
 
 
256 aa  75.1  0.0000000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
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