More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_1859 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  100 
 
 
220 aa  452  1.0000000000000001e-126  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0303  transcriptional regulator, Crp/Fnr family  43.2 
 
 
228 aa  165  5.9999999999999996e-40  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  33.86 
 
 
240 aa  106  3e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  26.76 
 
 
218 aa  94  2e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  30.54 
 
 
229 aa  91.3  1e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  26.61 
 
 
242 aa  89.7  3e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  28.04 
 
 
229 aa  87  2e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  27.14 
 
 
222 aa  86.7  3e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  27.72 
 
 
254 aa  86.3  3e-16  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_008262  CPR_1062  Crp/FNR family transcriptional regulator  28.28 
 
 
236 aa  86.3  4e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  28.28 
 
 
236 aa  85.5  6e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  27.01 
 
 
224 aa  85.1  7e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  28.28 
 
 
217 aa  85.5  7e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  28.44 
 
 
228 aa  85.1  7e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  29.1 
 
 
231 aa  84.3  0.000000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  27.92 
 
 
226 aa  84.3  0.000000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  27.72 
 
 
254 aa  84  0.000000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  27.19 
 
 
228 aa  82.8  0.000000000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  26.85 
 
 
225 aa  82  0.000000000000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  26.64 
 
 
226 aa  81.6  0.000000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  27.17 
 
 
254 aa  82  0.000000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  28.27 
 
 
226 aa  82  0.000000000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  25.57 
 
 
224 aa  82  0.000000000000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  26.17 
 
 
226 aa  81.6  0.000000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  29.03 
 
 
225 aa  81.6  0.000000000000009  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  26.85 
 
 
225 aa  80.9  0.00000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  26.63 
 
 
254 aa  80.1  0.00000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  26.74 
 
 
243 aa  79.7  0.00000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  28.21 
 
 
224 aa  79.7  0.00000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  25.59 
 
 
218 aa  79.7  0.00000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  27.4 
 
 
230 aa  79  0.00000000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  27.83 
 
 
235 aa  78.6  0.00000000000007  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  27.4 
 
 
230 aa  78.2  0.00000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  27.4 
 
 
226 aa  78.2  0.00000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  22.64 
 
 
230 aa  78.2  0.00000000000008  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  22.64 
 
 
230 aa  78.2  0.00000000000008  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  27.4 
 
 
230 aa  78.2  0.00000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  27.4 
 
 
230 aa  78.2  0.00000000000009  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  27.4 
 
 
230 aa  78.2  0.00000000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.61 
 
 
227 aa  77.8  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  26.76 
 
 
230 aa  77.8  0.0000000000001  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  27.4 
 
 
230 aa  77.4  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  22.9 
 
 
223 aa  77.4  0.0000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  25 
 
 
267 aa  77.4  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  26.44 
 
 
230 aa  77  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  23.36 
 
 
223 aa  77  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  27.5 
 
 
228 aa  76.3  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  26 
 
 
220 aa  76.3  0.0000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  26.8 
 
 
231 aa  76.3  0.0000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  26.15 
 
 
226 aa  76.3  0.0000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  25.11 
 
 
234 aa  76.3  0.0000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.12 
 
 
243 aa  75.9  0.0000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  27.69 
 
 
223 aa  75.5  0.0000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  21.2 
 
 
228 aa  75.1  0.0000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.15 
 
 
228 aa  75.1  0.0000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  26.02 
 
 
226 aa  75.1  0.0000000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  30.89 
 
 
248 aa  74.7  0.000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  27.75 
 
 
227 aa  74.3  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  24.66 
 
 
225 aa  74.3  0.000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.88 
 
 
225 aa  74.3  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  25.38 
 
 
234 aa  74.3  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  25.71 
 
 
241 aa  73.6  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  24.32 
 
 
225 aa  74.3  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  26.42 
 
 
226 aa  73.9  0.000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  25.76 
 
 
236 aa  73.6  0.000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  26.15 
 
 
225 aa  73.6  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  26.29 
 
 
230 aa  73.6  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  28.65 
 
 
236 aa  73.2  0.000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  23.78 
 
 
227 aa  72.8  0.000000000004  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  26.7 
 
 
222 aa  72.4  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  25.25 
 
 
236 aa  72.4  0.000000000005  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  27.78 
 
 
228 aa  72.4  0.000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  27.62 
 
 
251 aa  72.4  0.000000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  27.36 
 
 
224 aa  72  0.000000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  29.63 
 
 
218 aa  72  0.000000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  27.36 
 
 
224 aa  72  0.000000000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.7 
 
 
227 aa  72  0.000000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  27.36 
 
 
224 aa  72  0.000000000006  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  27.36 
 
 
224 aa  72  0.000000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  27.36 
 
 
224 aa  72  0.000000000006  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  26.87 
 
 
224 aa  72  0.000000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  26.07 
 
 
226 aa  71.6  0.000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  28.64 
 
 
232 aa  71.6  0.000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  25.94 
 
 
229 aa  71.2  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  27.06 
 
 
225 aa  70.9  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  22.7 
 
 
222 aa  70.9  0.00000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  26.87 
 
 
224 aa  70.9  0.00000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_009565  TBFG_11692  transcriptional regulator  25.79 
 
 
244 aa  70.1  0.00000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.476097 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  27.27 
 
 
224 aa  70.9  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  26.54 
 
 
230 aa  70.5  0.00000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25.63 
 
 
226 aa  70.1  0.00000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  26.64 
 
 
222 aa  70.5  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.32 
 
 
225 aa  70.5  0.00000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  25.76 
 
 
227 aa  70.1  0.00000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  26.63 
 
 
256 aa  70.5  0.00000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3110  cyclic nucleotide-binding protein  23.98 
 
 
222 aa  70.1  0.00000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  26.5 
 
 
224 aa  69.7  0.00000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  26.23 
 
 
251 aa  69.3  0.00000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.13 
 
 
225 aa  69.3  0.00000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.65 
 
 
236 aa  69.3  0.00000000004  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
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