| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4099 |
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| Symbol | |
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| ID | 6159947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4599129 |
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| End bp | 4599842 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666877 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001793116 |
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| Protein GI | 171060767 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000655046 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACACTT GCGCCGAACT GGACCTTCGC CTAAGTTCAG TGCCCATGAG TTCACGCACG
GGCCGCCCCG GGGCCGCCAC CCCGTCACTC GACGAACTGC CTTTTTCACC GGCGCTGCGC
GCGCTGGCCG AACGCGCCGA GCCGCGCCGC TACCGCAAGG GCGTGCTGCT GATCCAGGAG
GGCGACCAGG GCGACACGCT CTACATCGTG CTGAGCGGGC GGGTGCGGGC GTTTTCGCAG
GGCGACAACG AACGCGAGAT CACCTACGGC GTCTACGGGC CGGGTGAATA CGTCGGCGAG
ATCAGCCTCG ACGGCGGGCC GCGCTCGGCC AGCGTGATCA CGGTCGAGCC GACCGCCTGC
GTGGTGATCC CGCGCCAGAC GCTGCTGCTG CACATCGCGC AGTACCCCGA GTTCGCCTTC
GAGCTGCTCG CCAAGGTGAT CCGGCGCGCC CGCGCGGCCA CGCTGTCGGC CAAGCAGCTG
GCGCTCAACG ACGTCTACGG GCGGCTGCGC GCGCTGCTCG AGTCGCTGGC CGAGGCGCAG
CCCGACGGCA CGCGCCAGGT CGGCGAGCGC CTGACGCACC AGGACATGGC CAACCGGCTG
GGCTGCTCGC GCGAGATGGT GAGCCGGCTG ATGAAGGATC TCGAGGAAGG CGGTTACGTG
GCCGTCAACG GACATACCCT GGTGCTGCCC CGCGCCCTGC CGGCGCGCTG GTAG
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| Protein sequence | MDTCAELDLR LSSVPMSSRT GRPGAATPSL DELPFSPALR ALAERAEPRR YRKGVLLIQE
GDQGDTLYIV LSGRVRAFSQ GDNEREITYG VYGPGEYVGE ISLDGGPRSA SVITVEPTAC
VVIPRQTLLL HIAQYPEFAF ELLAKVIRRA RAATLSAKQL ALNDVYGRLR ALLESLAEAQ
PDGTRQVGER LTHQDMANRL GCSREMVSRL MKDLEEGGYV AVNGHTLVLP RALPARW
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