Gene Swit_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2706 
Symbol 
ID5198740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2990700 
End bp2991386 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID640582260 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001263200 
Protein GI148555618 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.154877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAG CCGAACTCGC AGCGCACCTG CCCAAGGGCA GCGTCTTCGC GGATTGCGAC 
GATGCCGAGC TTGCCGACCT GCTGTCGGTC GGCTCGCTCC AGCCGACCCG CTCGAACGAG
GAGATATTGC GCCAGGGCGA CGAGGGCACC TCGCTGCTGC TGGTCCTCGA CGGCGTGGTG
CGCATCTCGC TGGTGACGCC GAACGGGCGC GAGATCATCC TCGACTATGC CGAGGCGGGC
GCGGTGCTGG GCGAGATCGC GGTGCTCGAC GGCCAGCCGC GCACCGCCTC GGCGACGGCG
ATGTGGCCGG GGCGGCTGCT CCGCATCCCG CGCGCCAGCT TCTTCGCCTT CCTCGAACGC
CATCCCAAGG TGGCGGTACG GCTGCTGCGG GAGATGGCGC GCCGGCTGCG CGAGACCGAC
AGCACGATCG AGAGCGACCG CGCCTTCACC ACCGCGCCGC GCCTCGCCCG CTATCTCAAG
CGGCTGACCG ACCAGAAGAT GCACGGCGCC AAGCTGACCC GCGACCTCAG CCAGTCGGAG
CTCGGCAGCT TCGTCGGCAT CAGCCGCGAG AACATCAACC GCCAGCTCGC CGCCTGGGCG
AGCGAGGGGG TGATCGAGCT GACCCAGGGC AAGATCCGGA TCGTCGATCC CGATTACCTC
ACCCAGATCG CCGAGGCGGC GGAGTAG
 
Protein sequence
MTPAELAAHL PKGSVFADCD DAELADLLSV GSLQPTRSNE EILRQGDEGT SLLLVLDGVV 
RISLVTPNGR EIILDYAEAG AVLGEIAVLD GQPRTASATA MWPGRLLRIP RASFFAFLER
HPKVAVRLLR EMARRLRETD STIESDRAFT TAPRLARYLK RLTDQKMHGA KLTRDLSQSE
LGSFVGISRE NINRQLAAWA SEGVIELTQG KIRIVDPDYL TQIAEAAE