| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2706 |
|---|
| Symbol | |
|---|
| ID | 5198740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2990700 |
|---|
| End bp | 2991386 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582260 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_001263200 |
|---|
| Protein GI | 148555618 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.154877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAG CCGAACTCGC AGCGCACCTG CCCAAGGGCA GCGTCTTCGC GGATTGCGAC
GATGCCGAGC TTGCCGACCT GCTGTCGGTC GGCTCGCTCC AGCCGACCCG CTCGAACGAG
GAGATATTGC GCCAGGGCGA CGAGGGCACC TCGCTGCTGC TGGTCCTCGA CGGCGTGGTG
CGCATCTCGC TGGTGACGCC GAACGGGCGC GAGATCATCC TCGACTATGC CGAGGCGGGC
GCGGTGCTGG GCGAGATCGC GGTGCTCGAC GGCCAGCCGC GCACCGCCTC GGCGACGGCG
ATGTGGCCGG GGCGGCTGCT CCGCATCCCG CGCGCCAGCT TCTTCGCCTT CCTCGAACGC
CATCCCAAGG TGGCGGTACG GCTGCTGCGG GAGATGGCGC GCCGGCTGCG CGAGACCGAC
AGCACGATCG AGAGCGACCG CGCCTTCACC ACCGCGCCGC GCCTCGCCCG CTATCTCAAG
CGGCTGACCG ACCAGAAGAT GCACGGCGCC AAGCTGACCC GCGACCTCAG CCAGTCGGAG
CTCGGCAGCT TCGTCGGCAT CAGCCGCGAG AACATCAACC GCCAGCTCGC CGCCTGGGCG
AGCGAGGGGG TGATCGAGCT GACCCAGGGC AAGATCCGGA TCGTCGATCC CGATTACCTC
ACCCAGATCG CCGAGGCGGC GGAGTAG
|
|---|
| Protein sequence | MTPAELAAHL PKGSVFADCD DAELADLLSV GSLQPTRSNE EILRQGDEGT SLLLVLDGVV
RISLVTPNGR EIILDYAEAG AVLGEIAVLD GQPRTASATA MWPGRLLRIP RASFFAFLER
HPKVAVRLLR EMARRLRETD STIESDRAFT TAPRLARYLK RLTDQKMHGA KLTRDLSQSE
LGSFVGISRE NINRQLAAWA SEGVIELTQG KIRIVDPDYL TQIAEAAE
|
|---|
| |