More than 300 homologs were found in PanDaTox collection
for query gene Tmz1t_1459 on replicon NC_011662
Organism: Thauera sp. MZ1T



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  100 
 
 
228 aa  460  1e-129  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  60.27 
 
 
222 aa  257  1e-67  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  50.45 
 
 
247 aa  199  1.9999999999999998e-50  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  50 
 
 
229 aa  191  6e-48  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  46.63 
 
 
220 aa  191  6e-48  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  49.24 
 
 
222 aa  188  7e-47  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  43.27 
 
 
216 aa  171  6.999999999999999e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  43.81 
 
 
223 aa  169  4e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  41.04 
 
 
224 aa  168  6e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  40.48 
 
 
220 aa  167  1e-40  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  40.48 
 
 
231 aa  167  1e-40  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  46.5 
 
 
230 aa  162  3e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  36.67 
 
 
225 aa  159  4e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  37.88 
 
 
221 aa  158  8e-38  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  42.86 
 
 
224 aa  154  1e-36  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  43.72 
 
 
223 aa  151  8e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  42.03 
 
 
224 aa  147  1.0000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  37.68 
 
 
229 aa  146  2.0000000000000003e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  40.78 
 
 
218 aa  145  5e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  37.56 
 
 
213 aa  145  5e-34  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  40.78 
 
 
218 aa  145  5e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  39.82 
 
 
224 aa  144  1e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  38.5 
 
 
240 aa  142  6e-33  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  31.25 
 
 
235 aa  124  9e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  31.69 
 
 
224 aa  119  4.9999999999999996e-26  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  33.33 
 
 
283 aa  116  3e-25  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  33.33 
 
 
211 aa  113  2.0000000000000002e-24  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  31.22 
 
 
227 aa  110  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  29.84 
 
 
201 aa  109  3e-23  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  30.81 
 
 
212 aa  108  7.000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  29.21 
 
 
210 aa  107  1e-22  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  28.95 
 
 
208 aa  107  1e-22  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  28.22 
 
 
208 aa  102  4e-21  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  27.78 
 
 
212 aa  95.5  6e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  27.81 
 
 
201 aa  90.1  2e-17  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  31.78 
 
 
224 aa  88.2  9e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  32.44 
 
 
218 aa  84.7  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  25.44 
 
 
233 aa  80.1  0.00000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  26.99 
 
 
226 aa  79.7  0.00000000000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  25.44 
 
 
233 aa  80.1  0.00000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.84 
 
 
227 aa  77.8  0.0000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  35.8 
 
 
218 aa  78.2  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  24.55 
 
 
243 aa  77.4  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  27.27 
 
 
252 aa  77.4  0.0000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  29.61 
 
 
234 aa  77.4  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  27.31 
 
 
234 aa  77  0.0000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  24.76 
 
 
236 aa  74.3  0.000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  29.36 
 
 
223 aa  74.7  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  24.19 
 
 
233 aa  73.6  0.000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0780  Crp/FNR family transcriptional regulator  34.74 
 
 
231 aa  73.6  0.000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.390237  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  24.88 
 
 
267 aa  73.6  0.000000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  24.67 
 
 
239 aa  72.8  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  23.94 
 
 
236 aa  72.8  0.000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  28.12 
 
 
234 aa  72.4  0.000000000005  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  28.95 
 
 
225 aa  72  0.000000000006  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.85 
 
 
229 aa  71.2  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  28.05 
 
 
222 aa  71.2  0.00000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2132  Crp/FNR family transcriptional regulator  25.91 
 
 
231 aa  70.5  0.00000000002  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00647195  normal  0.364317 
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  26.09 
 
 
350 aa  68.9  0.00000000006  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  27.78 
 
 
229 aa  68.9  0.00000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  24.11 
 
 
236 aa  68.6  0.00000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  26.99 
 
 
222 aa  67.8  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.32 
 
 
229 aa  67.8  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  31.15 
 
 
222 aa  67.8  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  25.45 
 
 
240 aa  68.2  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  27.31 
 
 
260 aa  67.4  0.0000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  24.34 
 
 
231 aa  66.6  0.0000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_03580  putative transcriptional regulator  30.26 
 
 
228 aa  66.6  0.0000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000980911  hitchhiker  0.0000000000977836 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.69 
 
 
226 aa  65.9  0.0000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2153  transcriptional regulator, Crp/Fnr family  31.1 
 
 
216 aa  65.5  0.0000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0015242 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  25.22 
 
 
236 aa  65.5  0.0000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0351  putative transcriptional regulator  30.58 
 
 
228 aa  65.5  0.0000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  23.18 
 
 
231 aa  65.1  0.0000000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  21.95 
 
 
231 aa  64.3  0.000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4483  transcriptional regulator, Crp/Fnr family  30.69 
 
 
243 aa  64.7  0.000000001  Ralstonia pickettii 12J  Bacteria  normal  normal  0.183908 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  21.95 
 
 
231 aa  64.3  0.000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  29.29 
 
 
227 aa  64.7  0.000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012857  Rpic12D_4617  transcriptional regulator, Crp/Fnr family  30.69 
 
 
243 aa  64.7  0.000000001  Ralstonia pickettii 12D  Bacteria  normal  0.652735  normal 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  27.91 
 
 
235 aa  63.9  0.000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  28.79 
 
 
227 aa  63.9  0.000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_007348  Reut_B5062  cyclic nucleotide-binding  25.96 
 
 
254 aa  63.2  0.000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.319018  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  28.12 
 
 
238 aa  63.2  0.000000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.04 
 
 
219 aa  63.5  0.000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.69 
 
 
224 aa  63.2  0.000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  28.27 
 
 
229 aa  63.2  0.000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  30.23 
 
 
224 aa  62.8  0.000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  27.18 
 
 
230 aa  62.8  0.000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_007948  Bpro_2580  Crp/FNR family transcriptional regulator  27.88 
 
 
231 aa  62.8  0.000000004  Polaromonas sp. JS666  Bacteria  normal  normal  0.117752 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  26.03 
 
 
224 aa  63.2  0.000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  27.23 
 
 
227 aa  62.4  0.000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  24.74 
 
 
218 aa  62.4  0.000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  21.17 
 
 
243 aa  62.4  0.000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  27.96 
 
 
228 aa  62  0.000000007  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  25.35 
 
 
224 aa  61.6  0.000000008  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_007952  Bxe_B0027  Crp/FNR family transcriptional regulator  29.47 
 
 
237 aa  61.6  0.000000008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  24.56 
 
 
240 aa  62  0.000000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  26.46 
 
 
235 aa  61.6  0.000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  25.71 
 
 
248 aa  61.6  0.000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.39 
 
 
225 aa  61.2  0.00000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  22.58 
 
 
228 aa  60.8  0.00000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
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