More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_0303 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_0303  transcriptional regulator, Crp/Fnr family  100 
 
 
228 aa  473  1e-132  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  43.2 
 
 
220 aa  165  6.9999999999999995e-40  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  33.7 
 
 
231 aa  107  2e-22  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.81 
 
 
242 aa  100  2e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  29.15 
 
 
226 aa  99.4  4e-20  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  32.38 
 
 
217 aa  99  5e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  30.81 
 
 
240 aa  98.6  6e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  29.9 
 
 
222 aa  98.6  6e-20  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  28.65 
 
 
224 aa  97.8  1e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.19 
 
 
226 aa  95.9  5e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  28.5 
 
 
218 aa  95.5  6e-19  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  29.21 
 
 
223 aa  95.5  7e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.75 
 
 
224 aa  95.1  9e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  28.23 
 
 
225 aa  94.7  9e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  31.28 
 
 
224 aa  94.7  1e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  29.84 
 
 
225 aa  94.4  1e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  27.75 
 
 
228 aa  93.2  3e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  28.26 
 
 
226 aa  93.2  3e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  30.77 
 
 
224 aa  92.8  4e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  26.67 
 
 
225 aa  92.8  4e-18  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  27.23 
 
 
224 aa  92.4  5e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  29.17 
 
 
225 aa  92.4  5e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  26.56 
 
 
224 aa  92  7e-18  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  27.37 
 
 
218 aa  91.7  9e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  28.09 
 
 
235 aa  90.9  1e-17  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  28.12 
 
 
243 aa  90.1  2e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  25.5 
 
 
225 aa  89.7  3e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  27.59 
 
 
225 aa  89.4  4e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.57 
 
 
225 aa  89  5e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  31.41 
 
 
223 aa  89  6e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  29.23 
 
 
225 aa  88.2  8e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  26.8 
 
 
230 aa  87.8  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  25.84 
 
 
225 aa  87.8  1e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  30.46 
 
 
224 aa  87.4  2e-16  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.09 
 
 
219 aa  87  2e-16  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  29.95 
 
 
224 aa  87.4  2e-16  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  27.09 
 
 
230 aa  87  2e-16  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  30.46 
 
 
224 aa  87.4  2e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  27.09 
 
 
230 aa  87  2e-16  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  30.46 
 
 
224 aa  87.4  2e-16  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  30.46 
 
 
224 aa  87.4  2e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  28.27 
 
 
225 aa  87.4  2e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.94 
 
 
228 aa  87  2e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  28.29 
 
 
254 aa  86.3  3e-16  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  25.93 
 
 
220 aa  86.7  3e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  29.95 
 
 
224 aa  85.9  4e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.18 
 
 
228 aa  85.9  5e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  29.38 
 
 
224 aa  85.9  5e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  26.5 
 
 
226 aa  85.9  5e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  27.69 
 
 
225 aa  85.9  5e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  29.84 
 
 
224 aa  85.9  5e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  29.44 
 
 
224 aa  85.5  6e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_010678  Rpic_4483  transcriptional regulator, Crp/Fnr family  27.75 
 
 
243 aa  85.1  8e-16  Ralstonia pickettii 12J  Bacteria  normal  normal  0.183908 
 
 
-
 
NC_012857  Rpic12D_4617  transcriptional regulator, Crp/Fnr family  27.75 
 
 
243 aa  85.1  8e-16  Ralstonia pickettii 12D  Bacteria  normal  0.652735  normal 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  29.89 
 
 
224 aa  85.1  8e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_1062  Crp/FNR family transcriptional regulator  29.76 
 
 
236 aa  84.7  0.000000000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  27 
 
 
226 aa  83.6  0.000000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_010682  Rpic_3408  transcriptional regulator, Crp/Fnr family  26.4 
 
 
243 aa  84  0.000000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.258046 
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  29.76 
 
 
236 aa  84.3  0.000000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  27.6 
 
 
225 aa  84  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  25.13 
 
 
231 aa  83.2  0.000000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  31.22 
 
 
224 aa  82  0.000000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  26.11 
 
 
228 aa  82.4  0.000000000000006  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  25.4 
 
 
222 aa  82  0.000000000000007  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  28.44 
 
 
226 aa  81.6  0.000000000000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  25.47 
 
 
243 aa  81.6  0.00000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.63 
 
 
225 aa  81.3  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  24.88 
 
 
222 aa  80.9  0.00000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_012856  Rpic12D_3062  transcriptional regulator, Crp/Fnr family  25.38 
 
 
232 aa  81.3  0.00000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003082  transcriptional regulator Crp/Fnr family  26.67 
 
 
231 aa  80.9  0.00000000000001  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00863529  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  30.05 
 
 
225 aa  80.5  0.00000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  28.64 
 
 
235 aa  80.1  0.00000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  30.88 
 
 
229 aa  80.5  0.00000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_03580  putative transcriptional regulator  26.77 
 
 
228 aa  80.9  0.00000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000980911  hitchhiker  0.0000000000977836 
 
 
-
 
NC_011666  Msil_3161  cyclic nucleotide-binding protein  31.82 
 
 
230 aa  79.7  0.00000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  29.47 
 
 
222 aa  78.6  0.00000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  28.8 
 
 
232 aa  79  0.00000000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_010678  Rpic_4858  transcriptional regulator, Crp/Fnr family  26.36 
 
 
230 aa  78.2  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  normal  0.748285 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  27.37 
 
 
236 aa  77.8  0.0000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3781  transcriptional regulator, Crp/Fnr family  26.36 
 
 
230 aa  78.2  0.0000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.505907  normal 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  25.26 
 
 
256 aa  78.2  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.95 
 
 
225 aa  78.2  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.56 
 
 
227 aa  77  0.0000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS01902  putative transcription regulator protein  28.78 
 
 
239 aa  76.3  0.0000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.980965  normal  0.145891 
 
 
-
 
NC_007908  Rfer_3511  Crp/FNR family transcriptional regulator  27.84 
 
 
233 aa  76.6  0.0000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  26.67 
 
 
254 aa  76.6  0.0000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  26.42 
 
 
234 aa  76.6  0.0000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  26.6 
 
 
239 aa  76.6  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  27.27 
 
 
222 aa  76.6  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  26.29 
 
 
260 aa  75.9  0.0000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  29.23 
 
 
231 aa  75.5  0.0000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  25.95 
 
 
226 aa  75.5  0.0000000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  26.15 
 
 
254 aa  75.1  0.0000000000008  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  25.27 
 
 
254 aa  75.1  0.0000000000008  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  28.43 
 
 
239 aa  75.1  0.0000000000009  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  26.15 
 
 
212 aa  74.7  0.000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  23.53 
 
 
238 aa  74.3  0.000000000001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0747  transcriptional regulator, putative  24.31 
 
 
266 aa  74.7  0.000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.59923  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  24.87 
 
 
226 aa  74.7  0.000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6723  putative cyclic-AMP receptor-like protein  30.41 
 
 
235 aa  74.3  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.823634  normal 
 
 
-
 
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