| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0880 |
|---|
| Symbol | |
|---|
| ID | 7257849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 969872 |
|---|
| End bp | 970531 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643560797 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_002457379 |
|---|
| Protein GI | 219666944 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.812688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACC CTAAAACAAT ACCAGATCTT GATCGATTTG CTTTTTTTCA CGGATTACCT
CCTGCTTTTC TCCAGACCTG GAAAAGAAAT TTCAGTAGGA TGAGCTTCGC AAAGAGGCAA
AGATTAGTTT TCCCCTCTTC CTGTTCGGAT GTAATTTTCT TTGTTCTTTC TGGCAAGGTA
AAAATTGCTT ATACATCAGA AGATGGTAAG GAATTTGCTA TTGCGATTCT TTCGGCAGGG
GAGGTCTATA GCGAACATTC CTTAGCGTTG GCAACAGCCA TCGAAAAAAC AGAAGTTCTA
TATGTCAGTA TGGCTGACTT TAAAGCTATG ATGGATGAAT GTCCGGAACT GGCCCGGCAT
TTGGTCCGCC TTCTGGGTAA AATTCTTCGC CTAACCAATG ATTTGATTGT TGATTTAGCT
TTTCGTGAGA CCTCCTCCCG TCTGGCGCGT GTTTTTCGGC GTACCATGCA GGGTAAGAAT
GATAATGCTA TTTACCTTAC CCATGAGGAA CTGGCATCTC TTAGCGGAAG TACACGCCAG
ACGATCAATG AAATCTTACG CCATTGGGAG CAGCAGGGGA TCGTGGCTTT GCACCGGGGA
TATGTGGTGC TATTACTGCC TGAGCGACTA TGGGAGAAGA TCAGTCATGA ATATTCATAA
|
|---|
| Protein sequence | MSNPKTIPDL DRFAFFHGLP PAFLQTWKRN FSRMSFAKRQ RLVFPSSCSD VIFFVLSGKV
KIAYTSEDGK EFAIAILSAG EVYSEHSLAL ATAIEKTEVL YVSMADFKAM MDECPELARH
LVRLLGKILR LTNDLIVDLA FRETSSRLAR VFRRTMQGKN DNAIYLTHEE LASLSGSTRQ
TINEILRHWE QQGIVALHRG YVVLLLPERL WEKISHEYS
|
|---|
| |